Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP1O15259 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 Vault.3-201ENST00000516676 95 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 RNU6-914P-201ENST00000516749 109 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 MTND2P38-201ENST00000522536 667 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 GLYCAM1-201ENST00000546596 285 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
NPHP1O15259 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.53□□□□□ -1.84
NPHP1O15259 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP1O15259 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.53□□□□□ -1.84
NPHP1O15259 AL512643.1-201ENST00000635735 524 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 FARSBP1-201ENST00000435808 1778 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPHP1O15259 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPHP1O15259 Y_RNA.22-201ENST00000362492 102 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 RNU6-658P-201ENST00000384606 106 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 RNU6-750P-201ENST00000390946 107 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 MIR887-201ENST00000401258 79 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 AL139095.1-201ENST00000404326 391 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 RN7SKP142-201ENST00000411236 328 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.52□□□□□ -1.85
NPHP1O15259 AL109913.1-201ENST00000421173 514 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP1O15259 SAR1AP4-201ENST00000429225 591 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.52□□□□□ -1.85
NPHP1O15259 AC244505.4-201ENST00000434905 287 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.52□□□□□ -1.85
NPHP1O15259 SSXP5-201ENST00000443473 287 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 Z96811.1-201ENST00000445880 108 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 AL513328.1-201ENST00000446460 224 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.52□□□□□ -1.85
NPHP1O15259 AL513124.1-201ENST00000450410 614 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 SEM1P1-201ENST00000506694 209 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.52□□□□□ -1.85
NPHP1O15259 RNU4-29P-201ENST00000515943 174 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 Y_RNA.689-201ENST00000516589 107 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 AC009902.1-201ENST00000519351 183 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP1O15259 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.52□□□□□ -1.85
NPHP1O15259 MIR4506-201ENST00000584693 77 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 AC007938.3-201ENST00000604965 623 ntBASIC3.52□□□□□ -1.85
NPHP1O15259 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.52□□□□□ -1.85
NPHP1O15259 MTND4P35-201ENST00000604257 1375 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP1O15259 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NPHP1O15259 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP1O15259 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NPHP1O15259 RNY1P12-201ENST00000364251 105 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 RNU6-169P-201ENST00000365336 107 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP1O15259 RNU6-195P-201ENST00000411352 109 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AC245054.2-201ENST00000415639 319 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AL513477.1-202ENST00000417061 214 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP1O15259 ISCA1P6-201ENST00000427740 390 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.51□□□□□ -1.85
NPHP1O15259 MYL8P-204ENST00000431574 518 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 RPL23AP30-201ENST00000432419 501 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AL136380.1-201ENST00000447970 162 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.51□□□□□ -1.85
NPHP1O15259 AC107626.1-201ENST00000471084 183 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AC109927.2-201ENST00000506416 303 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AC098591.2-201ENST00000510152 315 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP1O15259 AP002453.2-201ENST00000533503 320 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP1O15259 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.51□□□□□ -1.85
NPHP1O15259 SEPT7P9-203ENST00000604116 343 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AC090578.1-201ENST00000604955 591 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AC011939.3-201ENST00000613686 466 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 AL158063.1-201ENST00000615349 536 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
NPHP1O15259 AC110994.2-201ENST00000635481 492 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NPHP1O15259 MTND5P19-201ENST00000424872 1794 ntBASIC3.51□□□□□ -1.85
NPHP1O15259 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPHP1O15259 AL161431.1-201ENST00000618966 4205 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 RNU1-112P-201ENST00000364401 164 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 SNORA4.3-201ENST00000365564 137 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 SNORA46-201ENST00000384762 135 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 MIR9-1-201ENST00000385198 89 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 MIR301A-201ENST00000385261 86 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 RNU2-39P-201ENST00000410604 198 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC114491.1-201ENST00000416095 246 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC096649.2-201ENST00000416186 393 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHP1O15259 OR2B8P-201ENST00000432841 938 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC098826.1-201ENST00000433943 471 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC073614.1-201ENST00000438690 650 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 BRK1P2-201ENST00000442875 223 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 HMGN2P10-201ENST00000448085 265 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC128713.1-201ENST00000471495 306 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.5□□□□□ -1.85
NPHP1O15259 YWHAEP4-201ENST00000505390 198 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC091965.2-201ENST00000512324 613 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.5□□□□□ -1.85
NPHP1O15259 RNU6-1315P-201ENST00000517187 99 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 AP001646.1-201ENST00000527936 915 ntBASIC3.5□□□□□ -1.85
NPHP1O15259 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPHP1O15259 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms