Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.53□□□□□ -1.84
NPC1O15118 OR4G1P-203ENST00000641984 1631 ntBASIC3.53□□□□□ -1.84
NPC1O15118 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPC1O15118 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPC1O15118 RNA5SP42-201ENST00000364278 115 ntBASIC3.53□□□□□ -1.84
NPC1O15118 RNU6-283P-201ENST00000364788 107 ntBASIC3.53□□□□□ -1.84
NPC1O15118 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NPC1O15118 RNU6-876P-201ENST00000391295 104 ntBASIC3.53□□□□□ -1.84
NPC1O15118 AL391417.1-201ENST00000404100 426 ntBASIC3.53□□□□□ -1.84
NPC1O15118 RNU6-373P-201ENST00000411247 98 ntBASIC3.53□□□□□ -1.84
NPC1O15118 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.53□□□□□ -1.84
NPC1O15118 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.53□□□□□ -1.84
NPC1O15118 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.53□□□□□ -1.84
NPC1O15118 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPC1O15118 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.53□□□□□ -1.84
NPC1O15118 RPS29P31-201ENST00000446147 164 ntBASIC3.53□□□□□ -1.84
NPC1O15118 snoU13.28-201ENST00000459235 104 ntBASIC3.53□□□□□ -1.84
NPC1O15118 AC025518.1-201ENST00000479856 347 ntBASIC3.53□□□□□ -1.84
NPC1O15118 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPC1O15118 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.53□□□□□ -1.84
NPC1O15118 AP003122.3-201ENST00000526316 255 ntBASIC3.53□□□□□ -1.84
NPC1O15118 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPC1O15118 AC084851.1-201ENST00000529105 249 ntBASIC3.53□□□□□ -1.84
NPC1O15118 AP000867.2-201ENST00000532468 320 ntBASIC3.53□□□□□ -1.84
NPC1O15118 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.53□□□□□ -1.84
NPC1O15118 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.53□□□□□ -1.84
NPC1O15118 AL157871.3-201ENST00000557231 293 ntBASIC3.53□□□□□ -1.84
NPC1O15118 AC010525.2-201ENST00000590920 195 ntBASIC3.53□□□□□ -1.84
NPC1O15118 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.53□□□□□ -1.84
NPC1O15118 AL355598.1-201ENST00000604169 202 ntBASIC3.53□□□□□ -1.84
NPC1O15118 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.53□□□□□ -1.84
NPC1O15118 AL160281.1-201ENST00000605307 311 ntBASIC3.53□□□□□ -1.84
NPC1O15118 U6.42-201ENST00000618440 107 ntBASIC3.53□□□□□ -1.84
NPC1O15118 U4.6-201ENST00000621618 127 ntBASIC3.53□□□□□ -1.84
NPC1O15118 DUXAP9-208ENST00000622815 614 ntBASIC3.53□□□□□ -1.84
NPC1O15118 AC091953.5-201ENST00000622919 233 ntBASIC3.53□□□□□ -1.84
NPC1O15118 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.53□□□□□ -1.84
NPC1O15118 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPC1O15118 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
NPC1O15118 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPC1O15118 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPC1O15118 AC073073.2-201ENST00000609827 2578 ntBASIC3.53□□□□□ -1.85
NPC1O15118 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPC1O15118 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPC1O15118 Z83843.1-201ENST00000604070 3685 ntBASIC3.52□□□□□ -1.85
NPC1O15118 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.52□□□□□ -1.85
NPC1O15118 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPC1O15118 FRG1CP-201ENST00000358464 769 ntBASIC3.52□□□□□ -1.85
NPC1O15118 MIR423-201ENST00000362201 94 ntBASIC3.52□□□□□ -1.85
NPC1O15118 SNORA38.1-201ENST00000364172 131 ntBASIC3.52□□□□□ -1.85
NPC1O15118 RNU6-395P-201ENST00000365662 106 ntBASIC3.52□□□□□ -1.85
NPC1O15118 RHEBP3-201ENST00000411920 351 ntBASIC3.52□□□□□ -1.85
NPC1O15118 AC063979.1-201ENST00000415539 377 ntBASIC3.52□□□□□ -1.85
NPC1O15118 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.52□□□□□ -1.85
NPC1O15118 DBIP2-201ENST00000419076 262 ntBASIC3.52□□□□□ -1.85
NPC1O15118 AC099548.1-201ENST00000421443 426 ntBASIC3.52□□□□□ -1.85
NPC1O15118 HMGN2P30-201ENST00000423237 256 ntBASIC3.52□□□□□ -1.85
NPC1O15118 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.52□□□□□ -1.85
NPC1O15118 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.52□□□□□ -1.85
NPC1O15118 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.52□□□□□ -1.85
NPC1O15118 MTND3P16-201ENST00000452205 344 ntBASIC3.52□□□□□ -1.85
NPC1O15118 RPL12P25-201ENST00000455592 494 ntBASIC3.52□□□□□ -1.85
NPC1O15118 RNU7-180P-201ENST00000459240 63 ntBASIC3.52□□□□□ -1.85
NPC1O15118 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.52□□□□□ -1.85
NPC1O15118 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.52□□□□□ -1.85
NPC1O15118 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.52□□□□□ -1.85
NPC1O15118 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.52□□□□□ -1.85
NPC1O15118 PSMA2P1-201ENST00000526365 646 ntBASIC3.52□□□□□ -1.85
NPC1O15118 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.52□□□□□ -1.85
NPC1O15118 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.52□□□□□ -1.85
NPC1O15118 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.52□□□□□ -1.85
NPC1O15118 AL035413.2-201ENST00000604801 525 ntBASIC3.52□□□□□ -1.85
NPC1O15118 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
NPC1O15118 AC009033.1-201ENST00000624279 431 ntBASIC3.52□□□□□ -1.85
NPC1O15118 MIR3651-201ENST00000630427 90 ntBASIC3.52□□□□□ -1.85
NPC1O15118 AC110774.1-201ENST00000623567 2018 ntBASIC3.52□□□□□ -1.85
NPC1O15118 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.52□□□□□ -1.85
NPC1O15118 AC006504.1-201ENST00000562493 3666 ntBASIC3.51□□□□□ -1.85
NPC1O15118 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPC1O15118 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPC1O15118 MTND5P7-201ENST00000413558 1798 ntBASIC3.51□□□□□ -1.85
NPC1O15118 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPC1O15118 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPC1O15118 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPC1O15118 Y_RNA.33-201ENST00000362591 102 ntBASIC3.51□□□□□ -1.85
NPC1O15118 SNORA4.3-201ENST00000365564 137 ntBASIC3.51□□□□□ -1.85
NPC1O15118 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
NPC1O15118 MT-TL1-201ENST00000386347 75 ntBASIC3.51□□□□□ -1.85
NPC1O15118 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.51□□□□□ -1.85
NPC1O15118 Y_RNA.604-201ENST00000410574 102 ntBASIC3.51□□□□□ -1.85
NPC1O15118 AC017079.2-201ENST00000416102 485 ntBASIC3.51□□□□□ -1.85
NPC1O15118 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.51□□□□□ -1.85
NPC1O15118 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.51□□□□□ -1.85
NPC1O15118 AC008264.1-201ENST00000447612 367 ntBASIC3.51□□□□□ -1.85
NPC1O15118 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.51□□□□□ -1.85
NPC1O15118 AC010099.1-201ENST00000455434 375 ntBASIC3.51□□□□□ -1.85
NPC1O15118 RPL23AP11-201ENST00000475260 469 ntBASIC3.51□□□□□ -1.85
NPC1O15118 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.51□□□□□ -1.85
NPC1O15118 AC110794.1-201ENST00000505816 425 ntBASIC3.51□□□□□ -1.85
NPC1O15118 SNORD59.2-201ENST00000516873 68 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms