Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC067863.3-201ENST00000624172 122 ntBASIC1.18□□□□□ -2.22
CHD1O14646 RNU6-35P-201ENST00000384530 107 ntBASIC1.17□□□□□ -2.22
CHD1O14646 UBE2FP1-201ENST00000416536 447 ntBASIC1.17□□□□□ -2.22
CHD1O14646 NDUFA5P10-201ENST00000432147 357 ntBASIC1.17□□□□□ -2.22
CHD1O14646 AL022238.1-201ENST00000442557 355 ntBASIC1.17□□□□□ -2.22
CHD1O14646 MTND4LP3-201ENST00000468320 276 ntBASIC1.17□□□□□ -2.22
CHD1O14646 AC092470.1-201ENST00000546187 132 ntBASIC1.17□□□□□ -2.22
CHD1O14646 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.17□□□□□ -2.22
CHD1O14646 RNU6-220P-201ENST00000390919 107 ntBASIC1.16□□□□□ -2.22
CHD1O14646 RNA5SP212-201ENST00000391223 107 ntBASIC1.16□□□□□ -2.22
CHD1O14646 USP9YP33-201ENST00000412220 421 ntBASIC1.16□□□□□ -2.22
CHD1O14646 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.16□□□□□ -2.22
CHD1O14646 USP9YP35-201ENST00000435696 412 ntBASIC1.16□□□□□ -2.22
CHD1O14646 AL714022.1-201ENST00000439897 151 ntBASIC1.16□□□□□ -2.22
CHD1O14646 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.16□□□□□ -2.22
CHD1O14646 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.16□□□□□ -2.22
CHD1O14646 snoU109.1-201ENST00000459339 135 ntBASIC1.16□□□□□ -2.22
CHD1O14646 AC116337.2-201ENST00000477662 156 ntBASIC1.16□□□□□ -2.22
CHD1O14646 SNORA48.11-201ENST00000517015 89 ntBASIC1.16□□□□□ -2.22
CHD1O14646 RRN3P3-201ENST00000549207 578 ntBASIC1.16□□□□□ -2.22
CHD1O14646 AP002791.1-201ENST00000623291 381 ntBASIC1.16□□□□□ -2.22
CHD1O14646 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CHD1O14646 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
CHD1O14646 RNU1-72P-201ENST00000362976 153 ntBASIC1.15□□□□□ -2.22
CHD1O14646 Y_RNA.274-201ENST00000364714 101 ntBASIC1.15□□□□□ -2.22
CHD1O14646 FTH1P15-201ENST00000406984 280 ntBASIC1.15□□□□□ -2.22
CHD1O14646 MTCYBP3-201ENST00000445588 1137 ntBASIC1.15□□□□□ -2.22
CHD1O14646 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.15□□□□□ -2.22
CHD1O14646 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.15□□□□□ -2.22
CHD1O14646 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.15□□□□□ -2.22
CHD1O14646 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.15□□□□□ -2.22
CHD1O14646 AL669831.4-202ENST00000590817 238 ntBASIC1.15□□□□□ -2.22
CHD1O14646 RPL23AP32-201ENST00000395315 459 ntBASIC1.15□□□□□ -2.23
CHD1O14646 RPL30P13-201ENST00000418873 348 ntBASIC1.15□□□□□ -2.23
CHD1O14646 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.15□□□□□ -2.23
CHD1O14646 Z82190.1-201ENST00000454534 490 ntBASIC1.15□□□□□ -2.23
CHD1O14646 PNPLA4P1-201ENST00000458328 305 ntBASIC1.15□□□□□ -2.23
CHD1O14646 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.15□□□□□ -2.23
CHD1O14646 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.15□□□□□ -2.23
CHD1O14646 LRRC34P2-201ENST00000514850 553 ntBASIC1.15□□□□□ -2.23
CHD1O14646 AC104057.1-201ENST00000515547 497 ntBASIC1.15□□□□□ -2.23
CHD1O14646 RNU6-229P-201ENST00000516614 102 ntBASIC1.15□□□□□ -2.23
CHD1O14646 AC104997.1-201ENST00000519761 717 ntBASIC1.15□□□□□ -2.23
CHD1O14646 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.15□□□□□ -2.23
CHD1O14646 AC004923.2-201ENST00000529649 369 ntBASIC1.15□□□□□ -2.23
CHD1O14646 MIR4504-201ENST00000577413 92 ntBASIC1.15□□□□□ -2.23
CHD1O14646 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.15□□□□□ -2.23
CHD1O14646 AP003399.1-201ENST00000637534 361 ntBASIC1.15□□□□□ -2.23
CHD1O14646 LINC02211-204ENST00000642024 1070 ntBASIC1.15□□□□□ -2.23
CHD1O14646 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CHD1O14646 Y_RNA.493-201ENST00000384422 102 ntBASIC1.14□□□□□ -2.23
CHD1O14646 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CHD1O14646 BTF3L4P2-201ENST00000392798 346 ntBASIC1.14□□□□□ -2.23
CHD1O14646 RNU6-712P-201ENST00000410558 100 ntBASIC1.14□□□□□ -2.23
CHD1O14646 AC117454.1-201ENST00000491120 168 ntBASIC1.14□□□□□ -2.23
CHD1O14646 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.14□□□□□ -2.23
CHD1O14646 AC008834.1-201ENST00000511612 175 ntBASIC1.14□□□□□ -2.23
CHD1O14646 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.14□□□□□ -2.23
CHD1O14646 OR6C7P-201ENST00000547875 934 ntBASIC1.14□□□□□ -2.23
CHD1O14646 SNORD26-201ENST00000384147 75 ntBASIC1.13□□□□□ -2.23
CHD1O14646 PRRC2CP1-201ENST00000404428 159 ntBASIC1.13□□□□□ -2.23
CHD1O14646 OR9R1P-201ENST00000412200 877 ntBASIC1.13□□□□□ -2.23
CHD1O14646 AC096920.1-201ENST00000423991 241 ntBASIC1.13□□□□□ -2.23
CHD1O14646 AC092628.1-201ENST00000436250 252 ntBASIC1.13□□□□□ -2.23
CHD1O14646 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.13□□□□□ -2.23
CHD1O14646 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.13□□□□□ -2.23
CHD1O14646 AC022447.1-201ENST00000515358 464 ntBASIC1.13□□□□□ -2.23
CHD1O14646 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.13□□□□□ -2.23
CHD1O14646 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.13□□□□□ -2.23
CHD1O14646 MTCYBP27-201ENST00000555160 670 ntBASIC1.13□□□□□ -2.23
CHD1O14646 AC010329.5-201ENST00000623497 2174 ntBASIC1.13□□□□□ -2.23
CHD1O14646 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.13□□□□□ -2.23
CHD1O14646 CBX3P1-201ENST00000325243 554 ntBASIC1.12□□□□□ -2.23
CHD1O14646 RNA5SP276-201ENST00000362580 94 ntBASIC1.12□□□□□ -2.23
CHD1O14646 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
CHD1O14646 RNU6-1328P-201ENST00000410938 106 ntBASIC1.12□□□□□ -2.23
CHD1O14646 EDDM3CP-201ENST00000415977 425 ntBASIC1.12□□□□□ -2.23
CHD1O14646 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.12□□□□□ -2.23
CHD1O14646 AC000111.3-201ENST00000433478 193 ntBASIC1.12□□□□□ -2.23
CHD1O14646 AC092573.2-201ENST00000434546 243 ntBASIC1.12□□□□□ -2.23
CHD1O14646 AC139453.3-201ENST00000493276 369 ntBASIC1.12□□□□□ -2.23
CHD1O14646 AC098862.1-201ENST00000504991 413 ntBASIC1.12□□□□□ -2.23
CHD1O14646 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.12□□□□□ -2.23
CHD1O14646 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.12□□□□□ -2.23
CHD1O14646 HMGB1P14-201ENST00000557424 591 ntBASIC1.12□□□□□ -2.23
CHD1O14646 AP006248.3-201ENST00000623580 594 ntBASIC1.12□□□□□ -2.23
CHD1O14646 ELL2P3-201ENST00000457883 1602 ntBASIC1.12□□□□□ -2.23
CHD1O14646 RNU6-167P-201ENST00000384292 106 ntBASIC1.12□□□□□ -2.23
CHD1O14646 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CHD1O14646 RNU2-41P-201ENST00000410991 178 ntBASIC1.12□□□□□ -2.23
CHD1O14646 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.12□□□□□ -2.23
CHD1O14646 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.12□□□□□ -2.23
CHD1O14646 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.12□□□□□ -2.23
CHD1O14646 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.12□□□□□ -2.23
CHD1O14646 RNU7-23P-201ENST00000459465 62 ntBASIC1.12□□□□□ -2.23
CHD1O14646 FAM206BP-201ENST00000510179 541 ntBASIC1.12□□□□□ -2.23
CHD1O14646 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
CHD1O14646 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CHD1O14646 AL356473.1-201ENST00000406203 1408 ntBASIC1.11□□□□□ -2.23
CHD1O14646 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms