Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SNORA48.2-201ENST00000390926 124 ntBASIC4.7□□□□□ -1.66
SOX1O00570 SNORD115-46-201ENST00000390982 71 ntBASIC4.7□□□□□ -1.66
SOX1O00570 AL603910.2-201ENST00000407268 136 ntBASIC4.7□□□□□ -1.66
SOX1O00570 AP000275.1-201ENST00000411943 390 ntBASIC4.7□□□□□ -1.66
SOX1O00570 SNORD56-201ENST00000413522 71 ntBASIC4.7□□□□□ -1.66
SOX1O00570 RPL23AP25-201ENST00000430973 463 ntBASIC4.7□□□□□ -1.66
SOX1O00570 AL513124.1-201ENST00000450410 614 ntBASIC4.7□□□□□ -1.66
SOX1O00570 AL138752.1-201ENST00000452964 351 ntBASIC4.7□□□□□ -1.66
SOX1O00570 ISCUP1-201ENST00000454451 448 ntBASIC4.7□□□□□ -1.66
SOX1O00570 UBE2DNL-203ENST00000474922 222 ntBASIC4.7□□□□□ -1.66
SOX1O00570 ENPP7P11-201ENST00000505915 627 ntBASIC4.7□□□□□ -1.66
SOX1O00570 RNU1-95P-201ENST00000516357 160 ntBASIC4.7□□□□□ -1.66
SOX1O00570 RNU1-128P-201ENST00000516704 160 ntBASIC4.7□□□□□ -1.66
SOX1O00570 RNA5SP471-201ENST00000516971 106 ntBASIC4.7□□□□□ -1.66
SOX1O00570 AC098826.3-201ENST00000603823 466 ntBASIC4.7□□□□□ -1.66
SOX1O00570 BX284668.6-201ENST00000606899 438 ntBASIC4.7□□□□□ -1.66
SOX1O00570 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.7□□□□□ -1.66
SOX1O00570 AC091903.1-201ENST00000624322 454 ntBASIC4.7□□□□□ -1.66
SOX1O00570 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.7□□□□□ -1.66
SOX1O00570 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.7□□□□□ -1.66
SOX1O00570 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SOX1O00570 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.7□□□□□ -1.66
SOX1O00570 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SOX1O00570 CPHL1P-201ENST00000461341 3407 ntBASIC4.7□□□□□ -1.66
SOX1O00570 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SOX1O00570 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SOX1O00570 AC104623.2-202ENST00000623477 4002 ntBASIC4.69□□□□□ -1.66
SOX1O00570 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SOX1O00570 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
SOX1O00570 MIR412-201ENST00000362142 91 ntBASIC4.69□□□□□ -1.66
SOX1O00570 RNU6-1167P-201ENST00000363227 94 ntBASIC4.69□□□□□ -1.66
SOX1O00570 RNU1-83P-201ENST00000363426 164 ntBASIC4.69□□□□□ -1.66
SOX1O00570 SNORA5A-201ENST00000384111 134 ntBASIC4.69□□□□□ -1.66
SOX1O00570 AL158156.1-201ENST00000422509 473 ntBASIC4.69□□□□□ -1.66
SOX1O00570 AC087650.1-201ENST00000431445 468 ntBASIC4.69□□□□□ -1.66
SOX1O00570 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.69□□□□□ -1.66
SOX1O00570 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.69□□□□□ -1.66
SOX1O00570 AC099522.1-202ENST00000514718 367 ntBASIC4.69□□□□□ -1.66
SOX1O00570 AC022868.1-201ENST00000517767 391 ntBASIC4.69□□□□□ -1.66
SOX1O00570 AL590705.4-201ENST00000532209 134 ntBASIC4.69□□□□□ -1.66
SOX1O00570 AC022968.1-201ENST00000567372 442 ntBASIC4.69□□□□□ -1.66
SOX1O00570 SNORD84-203ENST00000584275 78 ntBASIC4.69□□□□□ -1.66
SOX1O00570 AC079587.1-201ENST00000603846 277 ntBASIC4.69□□□□□ -1.66
SOX1O00570 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.69□□□□□ -1.66
SOX1O00570 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX1O00570 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SOX1O00570 AL592182.3-201ENST00000642132 3304 ntBASIC4.69□□□□□ -1.66
SOX1O00570 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SOX1O00570 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SOX1O00570 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SOX1O00570 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SOX1O00570 DDX18P3-201ENST00000404856 2007 ntBASIC4.68□□□□□ -1.66
SOX1O00570 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX1O00570 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX1O00570 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX1O00570 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX1O00570 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SOX1O00570 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX1O00570 AC004944.1-201ENST00000517807 3059 ntBASIC4.68□□□□□ -1.66
SOX1O00570 RNA5SP432-201ENST00000362480 116 ntBASIC4.68□□□□□ -1.66
SOX1O00570 snoU2_19.2-201ENST00000363024 80 ntBASIC4.68□□□□□ -1.66
SOX1O00570 SNORD81.1-201ENST00000363064 77 ntBASIC4.68□□□□□ -1.66
SOX1O00570 Y_RNA.274-201ENST00000364714 101 ntBASIC4.68□□□□□ -1.66
SOX1O00570 RNU6-384P-201ENST00000364900 104 ntBASIC4.68□□□□□ -1.66
SOX1O00570 RNU6-827P-201ENST00000365553 106 ntBASIC4.68□□□□□ -1.66
SOX1O00570 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX1O00570 UBBP2-201ENST00000376781 231 ntBASIC4.68□□□□□ -1.66
SOX1O00570 RNU6-1074P-201ENST00000383995 104 ntBASIC4.68□□□□□ -1.66
SOX1O00570 Y_RNA.439-201ENST00000384119 94 ntBASIC4.68□□□□□ -1.66
SOX1O00570 RNU6-356P-201ENST00000384140 107 ntBASIC4.68□□□□□ -1.66
SOX1O00570 RNU6-886P-201ENST00000384319 105 ntBASIC4.68□□□□□ -1.66
SOX1O00570 RNU6-1025P-201ENST00000410629 104 ntBASIC4.68□□□□□ -1.66
SOX1O00570 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX1O00570 MTND3P9-201ENST00000429526 346 ntBASIC4.68□□□□□ -1.66
SOX1O00570 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX1O00570 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.68□□□□□ -1.66
SOX1O00570 RN7SKP210-201ENST00000459176 261 ntBASIC4.68□□□□□ -1.66
SOX1O00570 AC087190.1-201ENST00000484462 480 ntBASIC4.68□□□□□ -1.66
SOX1O00570 AC107032.1-201ENST00000485945 480 ntBASIC4.68□□□□□ -1.66
SOX1O00570 RPS23P5-201ENST00000495419 428 ntBASIC4.68□□□□□ -1.66
SOX1O00570 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX1O00570 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX1O00570 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX1O00570 DEFB108E-201ENST00000524692 240 ntBASIC4.68□□□□□ -1.66
SOX1O00570 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX1O00570 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.68□□□□□ -1.66
SOX1O00570 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX1O00570 AL442163.3-201ENST00000554110 156 ntBASIC4.68□□□□□ -1.66
SOX1O00570 AC002545.1-201ENST00000592511 181 ntBASIC4.68□□□□□ -1.66
SOX1O00570 AL450472.1-202ENST00000637286 180 ntBASIC4.68□□□□□ -1.66
SOX1O00570 AL136164.3-201ENST00000624429 3978 ntBASIC4.68□□□□□ -1.66
SOX1O00570 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms