Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 RNU6-171P-201ENST00000384354 107 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 RNU1-82P-201ENST00000390851 165 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AP000907.1-201ENST00000428428 510 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AL138752.1-201ENST00000452964 351 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AC079168.2-201ENST00000453977 416 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AL136097.1-201ENST00000456945 913 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 snoU13.30-201ENST00000458951 104 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 RN7SL319P-201ENST00000480656 221 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AC091868.1-201ENST00000508746 304 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AC004980.4-201ENST00000513375 203 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 RNU6-1012P-201ENST00000516606 109 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AC091178.1-203ENST00000584586 279 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AC022726.1-201ENST00000587475 207 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 SCARNA4-201ENST00000629045 128 ntBASIC4.05□□□□□ -1.76
SHISA3A0PJX4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHISA3A0PJX4 AL136164.3-201ENST00000624429 3978 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 RNU6-105P-201ENST00000363909 104 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 SNORA7.2-201ENST00000364446 145 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 Y_RNA.297-201ENST00000364950 91 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 U3.15-201ENST00000365398 212 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 MIR93-201ENST00000385024 80 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AL358453.1-201ENST00000422522 250 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AL445305.1-201ENST00000432577 575 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AC104332.1-201ENST00000440471 797 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AC044860.2-201ENST00000561005 179 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 MIR4782-201ENST00000577987 79 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AC004792.1-201ENST00000614523 137 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AC240442.1-201ENST00000616055 283 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AC018445.2-201ENST00000622987 260 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 AP001148.1-201ENST00000624124 2359 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 NOL8P1-201ENST00000508336 3529 ntBASIC4.04□□□□□ -1.76
SHISA3A0PJX4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHISA3A0PJX4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AC233981.2-201ENST00000611524 1614 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 Y_RNA.54-201ENST00000362766 105 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 RNU6-1266P-201ENST00000362794 105 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 Y_RNA.143-201ENST00000363520 106 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 RNA5SP507-201ENST00000363603 121 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 Y_RNA.200-201ENST00000364018 102 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 Y_RNA.270-201ENST00000364693 104 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 Y_RNA.274-201ENST00000364714 101 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 RNA5SP22-201ENST00000365393 109 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 MIR513A2-201ENST00000385249 127 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 U3.37-201ENST00000408528 213 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 HLA-N-201ENST00000437516 135 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AL392103.1-201ENST00000447000 198 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AL389915.2-201ENST00000454576 441 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 RN7SL610P-201ENST00000463845 291 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 RN7SL222P-201ENST00000476452 299 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms