Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 ACA64.5-201ENST00000516207 127 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 ARL2BPP5-201ENST00000523141 481 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 PSMA3P-201ENST00000555485 635 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 ADAM3B-201ENST00000569937 840 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 SNORA77B-201ENST00000578179 125 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 AC211469.2-201ENST00000605461 205 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 AC011939.3-201ENST00000613686 466 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 AC107075.1-201ENST00000613695 314 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 AC013476.2-201ENST00000614456 459 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 AC092140.2-201ENST00000618027 521 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 ATP8A2P3-201ENST00000426792 1536 ntBASIC0.47□□□□□ -2.33
LINC01558Q9Y6Z2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 ZNF209P-201ENST00000593450 2304 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 MIR449A-201ENST00000362113 91 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-1164P-201ENST00000364428 107 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-968P-201ENST00000384076 107 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 PTMAP2-201ENST00000397627 327 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AL353621.1-201ENST00000418219 243 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 NCOR1P3-201ENST00000420479 303 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC139712.2-201ENST00000424302 339 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC004975.1-201ENST00000428733 208 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 COX6CP18-201ENST00000448769 222 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 RPS3AP14-201ENST00000483907 780 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC079598.5-201ENST00000547460 117 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC008127.2-201ENST00000549925 1075 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AL121821.2-201ENST00000556081 394 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC005951.2-201ENST00000576282 495 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC012213.3-201ENST00000577199 777 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 MIR4661-201ENST00000582720 75 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 MIR4653-201ENST00000585107 83 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AP001429.1-201ENST00000602568 530 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC008945.2-201ENST00000606056 604 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC026790.2-201ENST00000606282 430 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AL021879.1-201ENST00000611756 288 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC087241.4-201ENST00000612441 480 ntBASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC01558Q9Y6Z2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-414P-201ENST00000363705 104 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AL627390.1-201ENST00000396055 340 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-174P-201ENST00000410406 106 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-77P-201ENST00000410554 91 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 RN7SKP284-201ENST00000411002 343 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 MTCYBP38-201ENST00000417160 1123 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 FAM204CP-201ENST00000424489 642 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AL050321.1-201ENST00000432363 400 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AC091390.1-201ENST00000433904 331 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AL606490.8-201ENST00000441624 319 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AL441985.1-201ENST00000457727 251 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AC112771.1-201ENST00000463581 102 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 RPL21P47-201ENST00000483696 477 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AC010409.1-201ENST00000487382 476 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 PSMC1P5-201ENST00000512850 177 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-351P-201ENST00000516097 100 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 SNORD116-28-201ENST00000516123 91 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 RNVU1-2-201ENST00000516326 135 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 SULT1C2P1-202ENST00000562418 459 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 CYP3A52P-201ENST00000563326 91 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AC079148.1-201ENST00000565944 819 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AC115989.2-201ENST00000578640 563 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AL357094.1-201ENST00000603845 844 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AC093673.2-201ENST00000609674 331 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 AC099654.5-201ENST00000636479 350 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.45□□□□□ -2.34
LINC01558Q9Y6Z2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 HSBP1P2-201ENST00000299671 229 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 RN7SKP227-201ENST00000364445 330 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 RNU4-38P-201ENST00000364472 129 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 RNU6-1032P-201ENST00000384100 107 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 MIR506-201ENST00000384998 124 ntBASIC0.44□□□□□ -2.34
LINC01558Q9Y6Z2 MIR504-201ENST00000385065 83 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms