Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 PRO1804-201ENST00000623780 2050 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AC138393.1-203ENST00000327086 343 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 RNA5SP52-201ENST00000362448 134 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 Y_RNA.151-201ENST00000363566 112 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 RNU6-607P-201ENST00000411283 108 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AL158071.1-201ENST00000430315 461 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 SUMO1P3-201ENST00000439961 304 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 RNU6-1132P-201ENST00000459214 107 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 SNORA59A-201ENST00000459326 152 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AC110768.1-201ENST00000509222 400 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 FTH1P9-201ENST00000513251 355 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 RPL23AP87-202ENST00000573039 466 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AC087499.8-201ENST00000578406 226 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 MIR5188-201ENST00000583467 113 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 BDH2P1-201ENST00000602288 736 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AL365434.2-201ENST00000607979 234 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AC078938.1-201ENST00000620993 318 ntBASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCFC2Q9Y5Z7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 SNORD35B-201ENST00000363660 87 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 Y_RNA.314-201ENST00000365114 102 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 SNORA70E-201ENST00000384492 135 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 Y_RNA.534-201ENST00000384599 112 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 Y_RNA.551-201ENST00000384661 102 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 UBE2D3P2-201ENST00000424409 445 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 PRDX3P3-201ENST00000447765 522 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 RPS24P6-201ENST00000452670 400 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 RNU7-4P-201ENST00000516961 62 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 RNA5SP179-201ENST00000517284 121 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AC040926.1-201ENST00000530195 238 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AC026470.2-201ENST00000561492 181 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AC091167.4-201ENST00000605079 184 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 HMGB1P50-201ENST00000605814 607 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AL138721.1-201ENST00000616756 179 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AC015967.1-201ENST00000619893 476 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AL031601.2-202ENST00000622650 282 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 U6.104-201ENST00000637979 90 ntBASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HCFC2Q9Y5Z7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HCFC2Q9Y5Z7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HCFC2Q9Y5Z7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HCFC2Q9Y5Z7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 RNU4-42P-201ENST00000364738 142 ntBASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 RNU6-1303P-201ENST00000364841 107 ntBASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 Y_RNA.461-201ENST00000384263 103 ntBASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 Y_RNA.562-201ENST00000384695 113 ntBASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 RPL21P17-201ENST00000397467 475 ntBASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 MIR1271-201ENST00000408537 86 ntBASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 RNU6-1156P-201ENST00000410365 100 ntBASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 AL030996.1-201ENST00000411430 235 ntBASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 RPL7AP73-201ENST00000413490 353 ntBASIC4.21□□□□□ -1.74
HCFC2Q9Y5Z7 RPL21P90-201ENST00000415692 466 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms