Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 MTCO3P1-205ENST00000422088 832 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 AC246680.2-201ENST00000422106 389 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 SNRPGP13-201ENST00000442212 177 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 RNA5SP291-201ENST00000517222 105 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 MIR4666A-201ENST00000580160 79 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 AC040174.2-201ENST00000602701 465 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 AC013553.2-201ENST00000604244 589 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 AL021997.1-201ENST00000605757 193 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 RNU6-6P-201ENST00000606623 107 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 AC069294.1-201ENST00000608397 350 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 uc_338.20-201ENST00000621563 178 ntBASIC1.5□□□□□ -2.17
SCN10AQ9Y5Y9 RNU6-878P-201ENST00000384578 110 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 RNU6-932P-201ENST00000391108 106 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 AL133264.1-201ENST00000407157 562 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 AC117503.1-201ENST00000472241 394 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 AC104685.1-201ENST00000502445 371 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 AC112518.2-201ENST00000508565 425 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 AL391813.1-201ENST00000603098 260 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 SNORD14A-201ENST00000606526 91 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 AL589743.7-201ENST00000612637 233 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 MIR6767-201ENST00000637302 66 ntBASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
SCN10AQ9Y5Y9 SNORD114-22-201ENST00000365423 72 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 RNU4-27P-201ENST00000410889 139 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 RPL31P63-201ENST00000422565 375 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 EIF4EP4-201ENST00000424916 578 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AL365400.1-201ENST00000431854 640 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AP003033.1-201ENST00000527244 415 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AC093510.2-201ENST00000562820 896 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AP001429.1-201ENST00000602568 530 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AL627230.6-201ENST00000611129 280 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 SNORD65C-201ENST00000390962 71 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 NDUFS5P4-201ENST00000412983 318 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AC007742.1-201ENST00000425789 329 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AC008850.1-201ENST00000427546 362 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AL512844.2-201ENST00000433990 593 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 ELOCP26-201ENST00000436067 329 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 HMGN2P18-201ENST00000450680 270 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 NACAP3-201ENST00000552100 481 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.48□□□□□ -2.17
SCN10AQ9Y5Y9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 OR1L1-202ENST00000373686 1083 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 RNU1-148P-201ENST00000384472 162 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 SNORA40.19-201ENST00000390846 128 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 MED14P1-201ENST00000430517 648 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 MOB1AP2-201ENST00000446060 614 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AC090897.2-201ENST00000581715 130 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 OR4G1P-203ENST00000641984 1631 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 Y_RNA.112-201ENST00000363250 102 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 RNU4-51P-201ENST00000364206 140 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 MIR506-201ENST00000384998 124 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 CYCSP48-201ENST00000417124 323 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 SFR1P2-201ENST00000421841 730 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AC135279.1-201ENST00000543493 504 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AC090502.2-201ENST00000549267 280 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 MIR4765-201ENST00000585007 77 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AL158211.4-201ENST00000606988 584 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AC106052.1-201ENST00000608029 497 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AL359740.1-201ENST00000624340 592 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 AL590396.4-201ENST00000636779 956 ntBASIC1.47□□□□□ -2.17
SCN10AQ9Y5Y9 RNU1-72P-201ENST00000362976 153 ntBASIC1.46□□□□□ -2.18
SCN10AQ9Y5Y9 MIR95-201ENST00000385072 81 ntBASIC1.46□□□□□ -2.18
SCN10AQ9Y5Y9 AL590084.1-201ENST00000407885 387 ntBASIC1.46□□□□□ -2.18
SCN10AQ9Y5Y9 PPP1R11P2-201ENST00000423543 382 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms