Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 ZNF204P-201ENST00000416749 2397 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 RNU5F-3P-201ENST00000363767 117 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 RNU4-56P-201ENST00000364700 142 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 SNORA72.2-201ENST00000365028 127 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 SNORA29-201ENST00000384183 140 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AL645733.1-201ENST00000402250 217 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AL357139.1-201ENST00000407792 426 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 RN7SKP216-201ENST00000411050 312 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 Y_RNA.629-201ENST00000411368 105 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AC093162.1-201ENST00000419682 124 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 OOSP1P1-201ENST00000423265 274 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AC005042.3-201ENST00000453230 174 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 BTF3L4P4-201ENST00000506381 449 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 RN7SKP66-201ENST00000516681 231 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AL391261.3-201ENST00000557194 520 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AL356157.2-201ENST00000605122 111 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AC074101.1-201ENST00000637861 241 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 ASNSP1-201ENST00000518311 1939 ntBASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HRH3Q9Y5N1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 AC104623.2-202ENST00000623477 4002 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 RNA5SP443-201ENST00000363083 132 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 RNU6-1168P-201ENST00000390831 104 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 HLFP1-201ENST00000402375 499 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 RNU6-1001P-201ENST00000411265 100 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 AL162725.1-201ENST00000435405 301 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 SNRPEP9-201ENST00000436794 238 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 AC009127.1-201ENST00000467090 155 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 LINC00933-203ENST00000559812 219 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 KLKP1-201ENST00000595979 403 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 RPL7P50-201ENST00000600588 727 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 AL356489.2-201ENST00000566968 3528 ntBASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
HRH3Q9Y5N1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 RNU6-961P-201ENST00000363893 105 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 RNU6-312P-201ENST00000364629 107 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 RNU6-1130P-201ENST00000365434 107 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 RNU6-1145P-201ENST00000384246 107 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 SNORA22C-201ENST00000384614 134 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 Y_RNA.568-201ENST00000384742 113 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 MIR329-1-201ENST00000385028 80 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 RNU6-159P-201ENST00000391080 106 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 Y_RNA.595-201ENST00000410403 105 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 RNA5SP31-201ENST00000411144 127 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC005154.2-201ENST00000438110 379 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC010285.1-201ENST00000470580 392 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 RNU5F-8P-201ENST00000515941 111 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 TRAV28-201ENST00000557548 323 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 ZNF192P1-203ENST00000565888 810 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AP005432.2-201ENST00000608162 586 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC084757.4-201ENST00000616350 526 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 uc_338.7-201ENST00000621834 124 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AL592437.2-201ENST00000421655 2434 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 AC112198.2-201ENST00000426589 6996 ntBASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HRH3Q9Y5N1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms