Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU6-137P-201ENST00000363680 108 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 RN7SKP269-201ENST00000365545 319 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AL391361.1-201ENST00000405580 489 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 OR2AM1P-201ENST00000422137 422 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 RPS27P18-201ENST00000431701 247 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AC243964.1-201ENST00000441814 261 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AC096638.1-201ENST00000444678 216 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AL451050.1-201ENST00000450126 415 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 Y_RNA.683-201ENST00000516508 93 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 RN7SKP260-201ENST00000516907 149 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-1073P-201ENST00000517182 106 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 ZNF192P1-203ENST00000565888 810 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AL713866.2-201ENST00000603579 219 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 AL138963.2-201ENST00000605137 226 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.88□□□□□ -1.63
PCDHGA11Q9Y5H2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU1-108P-201ENST00000362556 161 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-658P-201ENST00000384606 106 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU2-61P-201ENST00000411069 191 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 RPL36AP10-201ENST00000421785 322 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 DDX39BP1-205ENST00000422507 192 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 AL354714.3-201ENST00000447284 493 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 AL389915.2-201ENST00000454576 441 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 RN7SL172P-201ENST00000460535 303 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 AC073901.1-201ENST00000462471 408 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 AC097484.1-201ENST00000471148 389 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 Y_RNA.662-201ENST00000516028 97 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 MIR3176-201ENST00000582210 90 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 MZT1P2-201ENST00000604387 248 ntBASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PCDHGA11Q9Y5H2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 AL136964.1-201ENST00000622038 2990 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 LINC01355-201ENST00000566551 5444 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-858P-201ENST00000362436 107 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 SNORA7.2-201ENST00000364446 145 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 SNORA29-201ENST00000384183 140 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 MIR223-201ENST00000385204 110 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 MTHFD2P2-201ENST00000407725 247 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 SNORA11.3-201ENST00000408471 128 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU4-30P-201ENST00000410245 143 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 AC098831.1-201ENST00000440661 216 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 AL031659.1-201ENST00000447075 539 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 COPS8P2-201ENST00000473228 627 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 AC117440.1-201ENST00000474107 571 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 RN7SL30P-201ENST00000488416 306 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 SNRPCP2-201ENST00000504370 475 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU1-103P-201ENST00000516502 125 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 SNORA11.6-201ENST00000619030 128 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 AC008785.1-201ENST00000624475 456 ntBASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHGA11Q9Y5H2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RNU6-1159P-201ENST00000362933 107 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 Y_RNA.286-201ENST00000364813 102 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 Y_RNA.319-201ENST00000365138 92 ntBASIC4.85□□□□□ -1.63
PCDHGA11Q9Y5H2 RNA5SP240-201ENST00000365355 128 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms