Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AL353729.1-201ENST00000425044 720 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 TBCAP1-201ENST00000436520 327 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 MTCO3P18-201ENST00000440206 761 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 CYCSP32-201ENST00000440548 321 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 RPL37P4-201ENST00000448908 268 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 RPL26P9-201ENST00000457466 433 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 RNU7-167P-201ENST00000459160 62 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 RPL21P93-201ENST00000480465 489 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 PRDX4P1-201ENST00000507189 574 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AC079140.5-201ENST00000507882 310 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AC074344.1-201ENST00000512823 224 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-572P-201ENST00000516724 80 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AF235103.2-201ENST00000525753 346 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 CENPUP1-201ENST00000526649 1202 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 H3F3AP1-201ENST00000559984 334 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 KLKP1-201ENST00000595979 403 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 RNVU1-4-201ENST00000612985 164 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AL161629.2-201ENST00000615347 275 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 AP003400.5-201ENST00000624827 617 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 U6.99-201ENST00000637524 83 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 MFSD8-236ENST00000641509 4050 ntBASIC3□□□□□ -1.93
LSM4Q9Y4Z0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
LSM4Q9Y4Z0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AP004289.2-201ENST00000444413 1457 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-166P-201ENST00000384371 107 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 RNU6-332P-201ENST00000391193 108 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 FGF7P8-201ENST00000402994 292 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 BX323014.1-201ENST00000412876 237 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 BX682237.1-201ENST00000415016 335 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 BPY2DP-201ENST00000422208 265 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AL121601.2-201ENST00000438019 707 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 PRPS1P1-201ENST00000445305 876 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 WASF1P1-201ENST00000447560 1131 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AL031183.1-201ENST00000457667 207 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC004801.2-202ENST00000463559 283 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 RPL7P49-201ENST00000471402 708 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 RN7SL323P-201ENST00000494712 295 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 RPS27AP10-201ENST00000496103 208 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 RPL7P47-201ENST00000497299 556 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 MTND3P25-201ENST00000509243 135 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 RAC1P2-201ENST00000511164 579 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 RNA5SP208-201ENST00000516156 78 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC026403.1-201ENST00000518938 295 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AL645944.1-201ENST00000603857 493 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 U2.17-201ENST00000611454 95 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 AC004852.3-201ENST00000614131 326 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 FP236240.3-201ENST00000623061 327 ntBASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.99□□□□□ -1.93
LSM4Q9Y4Z0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.98□□□□□ -1.93
LSM4Q9Y4Z0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LSM4Q9Y4Z0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
LSM4Q9Y4Z0 Y_RNA.157-201ENST00000363638 102 ntBASIC2.98□□□□□ -1.93
LSM4Q9Y4Z0 Y_RNA.378-201ENST00000365652 113 ntBASIC2.98□□□□□ -1.93
LSM4Q9Y4Z0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.98□□□□□ -1.93
LSM4Q9Y4Z0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms