Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AP003122.3-201ENST00000526316 255 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC087276.1-201ENST00000529659 480 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC005034.5-201ENST00000604219 466 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC131235.4-201ENST00000609288 620 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC009831.4-201ENST00000620744 325 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC112204.3-201ENST00000623822 332 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC091953.2-201ENST00000623979 160 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC138627.2-201ENST00000624202 601 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AL359851.1-201ENST00000569460 4997 ntBASIC1.92□□□□□ -2.1
RHBDD3Q9Y3P4 AC099786.3-201ENST00000565735 1410 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC006020.1-201ENST00000420179 1854 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 OR56A5-201ENST00000340110 738 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-777P-201ENST00000364265 104 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 MIR221-201ENST00000385135 110 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 GSTA9P-201ENST00000406231 611 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 RNA5SP338-201ENST00000410495 85 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AL353706.1-201ENST00000436728 494 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 RSU1P2-202ENST00000437884 485 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 RPS15AP9-201ENST00000439856 381 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 HIGD1AP2-201ENST00000446367 280 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC092001.1-201ENST00000453012 261 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC108059.3-201ENST00000456388 214 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 MRPS17P9-201ENST00000511924 393 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-276P-201ENST00000516114 96 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-143P-201ENST00000516942 93 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 RPS3AP4-201ENST00000555161 764 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC012213.3-201ENST00000577199 777 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 MIR4672-201ENST00000583126 81 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC068790.3-201ENST00000602988 553 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 RNU6-88P-201ENST00000606801 100 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 SCARNA15.3-201ENST00000626315 122 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 SCARNA4.1-201ENST00000628597 123 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 U6.99-201ENST00000637524 83 ntBASIC1.91□□□□□ -2.1
RHBDD3Q9Y3P4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
RHBDD3Q9Y3P4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC138393.1-203ENST00000327086 343 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 MIR561-201ENST00000385216 97 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 RNU6-817P-201ENST00000391083 104 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 MIR1305-201ENST00000408300 86 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC127391.1-201ENST00000411737 98 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 HMGB3P2-201ENST00000411913 584 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 RPS25P9-201ENST00000435591 252 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 RPL23AP41-201ENST00000484754 458 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 RPL23AP49-201ENST00000492925 468 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 SNORA48.11-201ENST00000517015 89 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 RNU6-64P-201ENST00000517119 105 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 MIR4782-201ENST00000577987 79 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC008121.3-201ENST00000618726 433 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC116618.1-201ENST00000634617 774 ntBASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.9□□□□□ -2.11
RHBDD3Q9Y3P4 CENPCP1-201ENST00000533085 2578 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 RNU6-188P-201ENST00000364207 107 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 RNU6-1280P-201ENST00000365211 107 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 RNU4-52P-201ENST00000384209 138 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 Y_RNA.472-201ENST00000384322 102 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 UBE2V1P2-201ENST00000397758 440 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 ERHP2-201ENST00000402323 299 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AL449283.1-202ENST00000418249 604 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AL160275.3-201ENST00000423876 471 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AL118520.1-201ENST00000450770 291 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms