Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC093677.1-201ENST00000514414 678 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 RNU6-928P-201ENST00000516876 104 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AP001189.2-201ENST00000527320 189 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC010186.2-204ENST00000537668 439 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC88CQ9P219 MIR4781-201ENST00000585250 76 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AL445435.1-201ENST00000604232 665 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC011451.2-201ENST00000604303 598 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC004853.1-201ENST00000604902 698 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC007349.4-201ENST00000608114 532 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC011939.3-201ENST00000613686 466 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC091932.3-201ENST00000624223 323 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC004520.1-201ENST00000608362 1413 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC88CQ9P219 AC010889.1-201ENST00000566193 2666 ntBASIC1.4□□□□□ -2.19
CCDC88CQ9P219 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RNU5B-4P-201ENST00000363508 111 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RNU6-359P-201ENST00000365466 108 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RNU6-1300P-201ENST00000391046 108 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AL356421.1-201ENST00000403255 413 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RNU6-1328P-201ENST00000410938 106 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 MTATP6P27-201ENST00000416987 621 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 Z80107.1-201ENST00000436830 412 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 BZW1P2-201ENST00000473537 826 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AP005902.1-201ENST00000521358 186 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC118273.2-201ENST00000532092 465 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC007229.1-201ENST00000590455 412 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 VN1R87P-201ENST00000596706 487 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 snoU13.31-201ENST00000607291 104 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AL021368.1-201ENST00000607490 540 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC009268.2-201ENST00000621925 457 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC231657.1-201ENST00000624313 397 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 Y_RNA.110-201ENST00000363220 99 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RNA5SP125-201ENST00000364843 120 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 Y_RNA.311-201ENST00000365068 96 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RNU6-1083P-201ENST00000384022 107 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RNU6-1122P-201ENST00000384449 107 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RPS24P7-201ENST00000416921 246 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 MTCO2P20-201ENST00000437339 673 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 COX6CP14-201ENST00000469580 174 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 HMGB3P17-201ENST00000504195 649 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 SUMO2P6-201ENST00000505273 288 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC113420.1-201ENST00000507903 571 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC023141.11-201ENST00000508864 202 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 MTND2P31-201ENST00000512602 616 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 TRMT112P2-201ENST00000512910 132 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RNU6-528P-201ENST00000516926 100 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC88CQ9P219 NACAP3-201ENST00000552100 481 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AL359821.1-201ENST00000605519 182 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AL157834.3-201ENST00000615543 103 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AL356094.1-201ENST00000624663 1212 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC120349.2-201ENST00000625002 298 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 MTND1P37-201ENST00000636562 264 ntBASIC1.39□□□□□ -2.19
CCDC88CQ9P219 AC007785.2-201ENST00000598627 1916 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC88CQ9P219 SNORD65.1-201ENST00000390889 71 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 USP9YP26-201ENST00000421008 661 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 FO393414.1-201ENST00000428697 1184 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AC004383.1-201ENST00000438135 289 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AC034222.1-201ENST00000494052 532 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 SNORA48.10-201ENST00000516965 160 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 RNU6-1261P-201ENST00000517194 104 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AP002748.2-201ENST00000528671 348 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AC004987.4-201ENST00000603383 338 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AC080078.3-201ENST00000605407 463 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AL390208.1-201ENST00000605885 644 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AC104763.3-201ENST00000613765 618 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AC002550.2-201ENST00000621246 394 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AC104985.3-201ENST00000623479 597 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AL512643.1-201ENST00000635735 524 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 AC006927.2-201ENST00000639256 389 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 MTND5P30-201ENST00000452896 1731 ntBASIC1.38□□□□□ -2.19
CCDC88CQ9P219 SNORA63.3-201ENST00000362682 132 ntBASIC1.37□□□□□ -2.19
CCDC88CQ9P219 RNU6-432P-201ENST00000384196 109 ntBASIC1.37□□□□□ -2.19
CCDC88CQ9P219 CISD1P1-201ENST00000393907 327 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms