Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.84□□□□□ -1.8
MKS1Q9NXB0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 Y_RNA.61-201ENST00000362835 102 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 RNU6-778P-201ENST00000363269 103 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 SNORD14B-201ENST00000364533 90 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 RNU6-283P-201ENST00000364788 107 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 MIR888-201ENST00000401186 77 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 RPL26P29-201ENST00000415623 438 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AL627311.1-201ENST00000431514 115 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AL078601.1-201ENST00000444542 271 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 RPS29P31-201ENST00000446147 164 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 RPS29P33-201ENST00000456717 146 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AC011276.1-201ENST00000469688 323 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 RNU1-103P-201ENST00000516502 125 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 RNU6-1088P-201ENST00000516850 104 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 RNU6-273P-201ENST00000516937 96 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AC069113.1-201ENST00000517763 267 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AL356218.2-201ENST00000605264 187 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AC087045.1-201ENST00000605856 382 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AC069234.5-201ENST00000611056 416 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AC104237.2-201ENST00000612456 443 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AC005344.1-201ENST00000613391 459 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 uc_338.15-201ENST00000615470 191 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AC068831.7-201ENST00000616954 363 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 AL359697.1-201ENST00000624879 587 ntBASIC3.83□□□□□ -1.8
MKS1Q9NXB0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MKS1Q9NXB0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 RNU6-884P-201ENST00000363889 107 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 RN7SKP280-201ENST00000364196 304 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 EI24P2-201ENST00000397776 1076 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AL391417.1-201ENST00000404100 426 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 RPL26P27-201ENST00000414397 437 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AC108032.1-201ENST00000416706 207 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AC099548.1-201ENST00000421443 426 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 HMGN2P30-201ENST00000423237 256 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 UQCRHP4-201ENST00000471686 272 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AC091167.1-201ENST00000492017 396 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AC026784.1-201ENST00000507986 352 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AC087854.1-201ENST00000519706 414 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 H3F3AP1-201ENST00000559984 334 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AC023043.2-201ENST00000589678 1026 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AL645944.1-201ENST00000603857 493 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AL138726.1-201ENST00000614873 333 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 AL359314.1-201ENST00000616913 261 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 U6.99-201ENST00000637524 83 ntBASIC3.82□□□□□ -1.8
MKS1Q9NXB0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.82□□□□□ -1.8
MKS1Q9NXB0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 Y_RNA.212-201ENST00000364177 102 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 SKA2P1-201ENST00000425592 390 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 MTATP6P7-201ENST00000453315 681 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 RPL21P11-201ENST00000461458 483 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 MTCO1P29-201ENST00000496868 288 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 RNU6-566P-201ENST00000516790 107 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 RNA5SP179-201ENST00000517284 121 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 NUTF2P8-201ENST00000604593 363 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 APOOP1-201ENST00000604695 592 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 AC091167.4-201ENST00000605079 184 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 AL138880.2-201ENST00000616214 239 ntBASIC3.81□□□□□ -1.8
MKS1Q9NXB0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.81□□□□□ -1.8
MKS1Q9NXB0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms