Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 SNORA24.1-201ENST00000384401 135 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 U3.26-201ENST00000391236 204 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AL122016.1-201ENST00000403365 367 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 NDUFS5P1-201ENST00000405668 289 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 RNU2-29P-201ENST00000410423 189 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 RNA5SP38-201ENST00000410750 119 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AC114491.1-201ENST00000416095 246 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 RPL31P12-201ENST00000422587 358 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AL513185.2-201ENST00000425543 193 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 ZNF863P-201ENST00000426746 417 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AC008628.2-201ENST00000502605 298 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 SNORD59.2-201ENST00000516873 68 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AC008945.2-201ENST00000606056 604 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AL589994.2-201ENST00000621124 579 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 MTND1P37-201ENST00000636562 264 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AC233263.6-201ENST00000631132 1963 ntBASIC3.67□□□□□ -1.82
VPS45Q9NRW7 AL359693.1-201ENST00000614959 2407 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AL139276.1-201ENST00000311910 1001 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 CBX3P1-201ENST00000325243 554 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 SNORD9-201ENST00000362566 104 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RNA5SP42-201ENST00000364278 115 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RNU6-61P-201ENST00000365528 109 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 SMIM11P1-201ENST00000369586 178 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RNU6-946P-201ENST00000383878 107 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RNU6-701P-201ENST00000384059 107 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RNU6-1029P-201ENST00000384109 107 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RNU6-817P-201ENST00000391083 104 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 U3.39-201ENST00000408569 239 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RNU6-387P-201ENST00000411331 105 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC093106.2-201ENST00000428212 385 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RPL36AP53-201ENST00000432891 316 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC008155.2-201ENST00000464337 397 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AL160314.1-201ENST00000490836 438 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 EIF4EP3-201ENST00000498782 656 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 RPL23AP94-201ENST00000512518 302 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC046134.1-201ENST00000514454 666 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 SUB1P1-201ENST00000524415 382 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AL138976.2-201ENST00000563989 694 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 MIR4703-201ENST00000577728 79 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 MIR4738-201ENST00000579134 87 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 UBE2V2P2-201ENST00000587677 504 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC010525.2-201ENST00000590920 195 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC174048.1-201ENST00000603389 144 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC135507.2-201ENST00000612443 309 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 MIR6852-201ENST00000621699 66 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC007998.5-201ENST00000622938 237 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC011155.2-201ENST00000623202 216 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AP003355.3-201ENST00000623465 114 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 AC073073.2-201ENST00000609827 2578 ntBASIC3.66□□□□□ -1.82
VPS45Q9NRW7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS45Q9NRW7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS45Q9NRW7 MTND4P12-201ENST00000498999 1377 ntBASIC3.65□□□□□ -1.82
VPS45Q9NRW7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
VPS45Q9NRW7 AC103988.1-201ENST00000566382 2177 ntBASIC3.65□□□□□ -1.82
VPS45Q9NRW7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.65□□□□□ -1.82
VPS45Q9NRW7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS45Q9NRW7 Y_RNA.70-201ENST00000362886 110 ntBASIC3.65□□□□□ -1.83
VPS45Q9NRW7 Y_RNA.72-201ENST00000362894 103 ntBASIC3.65□□□□□ -1.83
VPS45Q9NRW7 Y_RNA.86-201ENST00000363020 111 ntBASIC3.65□□□□□ -1.83
VPS45Q9NRW7 Y_RNA.279-201ENST00000364763 95 ntBASIC3.65□□□□□ -1.83
VPS45Q9NRW7 SNORD115-7-201ENST00000365306 82 ntBASIC3.65□□□□□ -1.83
VPS45Q9NRW7 SNORD37.1-201ENST00000390968 65 ntBASIC3.65□□□□□ -1.83
VPS45Q9NRW7 RNU6-903P-201ENST00000391270 109 ntBASIC3.65□□□□□ -1.83
VPS45Q9NRW7 RNU6-193P-201ENST00000410977 107 ntBASIC3.65□□□□□ -1.83
VPS45Q9NRW7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS45Q9NRW7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS45Q9NRW7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms