Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 FTLP6-201ENST00000355274 422 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 RNU1-39P-201ENST00000383897 165 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 RNU6-39P-201ENST00000384344 107 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 Y_RNA.481-201ENST00000384373 102 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 MIR514A1-201ENST00000385133 98 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 RPS4XP8-201ENST00000402039 771 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AL138827.1-201ENST00000402666 306 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 RNU2-39P-201ENST00000410604 198 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 ZNF90P2-204ENST00000419323 1075 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AL590383.1-201ENST00000428602 75 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 HMGB3P12-201ENST00000438745 556 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AC020550.1-201ENST00000447385 163 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 RPL23AP20-201ENST00000447965 421 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 RPL21P41-201ENST00000459863 264 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AP002884.2-201ENST00000471647 395 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 RPL30P14-201ENST00000482744 348 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AC117522.1-201ENST00000509821 380 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 SNORA31.1-201ENST00000515993 133 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 SNORA31.5-201ENST00000516190 133 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 SCARNA15.2-201ENST00000516409 127 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 RN7SKP258-201ENST00000517151 304 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AL512310.1-201ENST00000548639 172 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AL391646.1-201ENST00000603860 190 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AC107294.1-201ENST00000609524 467 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 AC004696.1-201ENST00000614345 607 ntBASIC3.34□□□□□ -1.87
DDX4Q9NQI0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
DDX4Q9NQI0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 RNU6-641P-201ENST00000384006 107 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 RNU6-301P-201ENST00000384277 107 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 MIR34A-201ENST00000385130 110 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 NDUFS5P1-201ENST00000405668 289 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AC091179.1-201ENST00000461606 579 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AC126389.1-201ENST00000477436 290 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AC019235.1-201ENST00000503847 207 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 MTATP6P3-201ENST00000581686 676 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AC007363.1-201ENST00000604736 620 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 AL157786.1-207ENST00000627771 695 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 CUL1P1-201ENST00000509510 2425 ntBASIC3.33□□□□□ -1.88
DDX4Q9NQI0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
DDX4Q9NQI0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 Y_RNA.9-201ENST00000362354 101 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 RNU4-82P-201ENST00000362443 140 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 Y_RNA.22-201ENST00000362492 102 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 RNU6-1085P-201ENST00000363576 107 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 Y_RNA.159-201ENST00000363674 87 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 RNU6-74P-201ENST00000384235 107 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 RNU6-606P-201ENST00000384721 111 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 CIR1P3-201ENST00000405137 479 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AL513331.1-201ENST00000411908 397 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AL451054.2-201ENST00000420896 202 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 NDUFB4P7-201ENST00000423198 363 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 RPL7P46-201ENST00000425129 740 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 USP9YP18-201ENST00000425912 695 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 RPL23AP30-201ENST00000432419 501 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 MTATP6P30-201ENST00000443540 664 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 DDX3P2-201ENST00000446138 111 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX4Q9NQI0 RNU4-29P-201ENST00000515943 174 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 SNORD27.1-201ENST00000516319 72 ntBASIC3.32□□□□□ -1.88
DDX4Q9NQI0 SNORA70.16-201ENST00000516390 95 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms