Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC015917.1-201ENST00000579654 510 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 DISC2.1-201ENST00000612827 205 ntBASIC3.05□□□□□ -1.92
HINT3Q9NQE9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HINT3Q9NQE9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 NACAP2-201ENST00000318548 624 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 RNA5SP197-201ENST00000363357 119 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 RNA5SP171-201ENST00000391071 115 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 RNA5SP38-201ENST00000410750 119 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 RNU2-68P-201ENST00000410878 191 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 RNU6-193P-201ENST00000410977 107 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 OR9R1P-201ENST00000412200 877 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 SNRPEP10-201ENST00000420249 274 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AL158156.1-201ENST00000422509 473 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 RPL23AP22-201ENST00000437556 453 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AL358232.1-201ENST00000448030 501 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC125238.1-201ENST00000448842 249 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 TRBV1-201ENST00000476502 284 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 RPS29P25-201ENST00000481709 171 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 RNU4-29P-201ENST00000515943 174 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 SNORD60.2-201ENST00000516883 86 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC068135.2-201ENST00000569293 1028 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 MIR4424-201ENST00000585257 86 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC019176.2-201ENST00000611579 315 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 MIR8058-201ENST00000615737 89 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 SNORD39.4-201ENST00000620099 78 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC024614.3-201ENST00000637860 256 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC093908.1-201ENST00000623125 8092 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HINT3Q9NQE9 AC007256.1-201ENST00000392253 2765 ntBASIC3.04□□□□□ -1.92
HINT3Q9NQE9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AC005183.1-201ENST00000603687 1979 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 SNORA71.3-201ENST00000362582 128 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 RNA5SP119-201ENST00000362715 117 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 RNU6-1283P-201ENST00000365314 105 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 RPL21P41-201ENST00000459863 264 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AC139453.3-201ENST00000493276 369 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AC069439.1-201ENST00000494739 167 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 RPL38P4-201ENST00000502376 214 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AC009901.1-201ENST00000506703 541 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 RNU6-1178P-201ENST00000516674 107 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AL137161.1-201ENST00000532231 390 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AL133241.1-201ENST00000556832 487 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AL157871.3-201ENST00000557231 293 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 MIR1273C-201ENST00000578669 77 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 MIR3922-201ENST00000585192 84 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 RMST_3.1-201ENST00000611651 109 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AL138880.2-201ENST00000616214 239 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 uc_338.34-201ENST00000617467 174 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AC099506.2-201ENST00000623074 221 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 AC073476.4-201ENST00000628409 72 ntBASIC3.03□□□□□ -1.92
HINT3Q9NQE9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HINT3Q9NQE9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
HINT3Q9NQE9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HINT3Q9NQE9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.02□□□□□ -1.93
HINT3Q9NQE9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.02□□□□□ -1.93
HINT3Q9NQE9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HINT3Q9NQE9 SRP72P2-201ENST00000344851 1979 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms