Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 RNU6-954P-201ENST00000411355 107 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 RPS12P24-201ENST00000412619 387 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 SSXP9-201ENST00000417503 292 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 ARL5AP1-201ENST00000418991 388 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AL691449.1-201ENST00000426570 421 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC234775.1-201ENST00000454247 670 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AL136097.1-201ENST00000456945 913 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 RPL21P8-201ENST00000465083 535 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC104472.2-201ENST00000469035 601 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 RN7SL330P-201ENST00000469709 307 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC084198.1-201ENST00000477747 402 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AL135752.1-201ENST00000479477 471 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 TRBV12-2-201ENST00000489763 344 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 RPS23P1-201ENST00000491662 432 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC008526.1-201ENST00000509149 338 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 RN7SKP295-201ENST00000517264 153 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 RANP9-201ENST00000519957 271 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC023575.1-201ENST00000580510 358 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 MIR4680-201ENST00000580906 66 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 MIR3939-201ENST00000582614 106 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 MIR4443-201ENST00000585052 53 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 BRDTP1-201ENST00000605735 677 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC007619.2-201ENST00000605743 379 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC012409.4-201ENST00000612923 249 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 TUG1_2.1-201ENST00000614234 87 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC007485.1-201ENST00000616755 206 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AL589994.2-201ENST00000621124 579 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC091925.1-201ENST00000623204 462 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AL669831.3-213ENST00000636676 183 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC119674.1-207ENST00000641355 633 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 AC006504.1-201ENST00000562493 3666 ntBASIC3.47□□□□□ -1.85
NRIP3Q9NQ35 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NRIP3Q9NQ35 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 RNA5SP443-201ENST00000363083 132 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 RNU6-82P-201ENST00000363970 107 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 EIF4E2P1-201ENST00000393781 255 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 MIR937-201ENST00000401271 86 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 NDUFS5P1-201ENST00000405668 289 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 HSPE1P8-201ENST00000406997 288 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 MIR548F4-201ENST00000408515 105 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 RNU6-1077P-201ENST00000410506 102 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 RNU4-6P-201ENST00000410804 122 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 RNU4-46P-201ENST00000410818 138 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AL356095.1-201ENST00000417217 199 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 TMEM167AP1-201ENST00000423409 219 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AL669831.1-202ENST00000428504 417 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 Y_RNA.653-201ENST00000459091 95 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 HMGN2P13-201ENST00000476476 274 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 RPL7P23-201ENST00000493874 747 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AC009901.1-201ENST00000506703 541 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AC002456.2-201ENST00000509356 380 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 RNU6-189P-201ENST00000516120 101 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AC025884.1-201ENST00000556034 378 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 MIR3921-201ENST00000577308 85 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 MIR5692C1-201ENST00000585309 91 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AL137849.1-201ENST00000604767 169 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AC005014.2-201ENST00000607795 599 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 AC009570.1-201ENST00000609599 745 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 MIR6076-201ENST00000617521 113 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 MIR492-201ENST00000638676 116 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 KPNA2P1-201ENST00000458289 1591 ntBASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NRIP3Q9NQ35 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
NRIP3Q9NQ35 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NRIP3Q9NQ35 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms