Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 TET1P1-201ENST00000426627 2301 ntBASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 AP005432.1-201ENST00000580891 3485 ntBASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-3Q9BYR4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNA5SP361-201ENST00000362686 118 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-170P-201ENST00000362832 104 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNY4P6-201ENST00000363667 96 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-961P-201ENST00000363893 105 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-879P-201ENST00000364328 108 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 Y_RNA.293-201ENST00000364908 93 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-54P-201ENST00000365563 107 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 SNORA70.9-201ENST00000384370 135 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 SNORD30.1-201ENST00000391309 70 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 MIR888-201ENST00000401186 77 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU2-70P-201ENST00000410718 179 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RPL37P18-201ENST00000411602 243 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC068138.1-201ENST00000412635 217 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AL592148.1-201ENST00000413568 445 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AL135786.1-201ENST00000415892 214 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 COX6B1P1-201ENST00000415962 213 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 MRPL35P3-201ENST00000421557 364 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RPL7AP61-201ENST00000443410 636 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC016700.2-201ENST00000446011 156 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RPL23AP15-201ENST00000450202 459 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC009220.1-201ENST00000451614 275 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AL133244.1-201ENST00000456007 258 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RN7SL189P-201ENST00000468631 289 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RN7SL354P-201ENST00000469282 294 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC097484.1-201ENST00000471148 389 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RN7SL860P-201ENST00000473738 223 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RN7SL814P-201ENST00000487715 300 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RPL21P129-201ENST00000491732 478 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC022493.1-201ENST00000492984 337 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RPL23AP55-201ENST00000498163 452 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU7-175P-201ENST00000515915 61 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-795P-201ENST00000516323 103 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-966P-201ENST00000516479 104 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU2-44P-201ENST00000516795 194 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-365P-201ENST00000517113 106 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU1-104P-201ENST00000517280 175 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC008694.2-201ENST00000517591 306 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC136777.2-201ENST00000522979 358 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 GSTP1P1-201ENST00000548078 319 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 RPL23AP84-201ENST00000571193 464 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 MIR378D2-201ENST00000580636 98 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 MIR548Z-201ENST00000584743 97 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 DEFB117-201ENST00000602356 141 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AL139124.1-201ENST00000609123 421 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC012531.4-201ENST00000616509 177 ntBASIC1.73□□□□□ -2.13
KRTAP4-3Q9BYR4 AC013791.1-201ENST00000616619 62 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms