Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 PSMD10P3-201ENST00000437000 448 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AP000281.1-201ENST00000444036 316 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SNRPGP12-201ENST00000449481 213 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU7-27P-201ENST00000459281 62 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 snoU13.3-201ENST00000459441 104 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL706P-201ENST00000460079 292 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL413P-201ENST00000482700 297 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RPL7AP30-201ENST00000482859 796 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 PDPN-205ENST00000487038 607 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC139272.1-201ENST00000505516 640 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ENPP7P3-201ENST00000509123 241 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC138866.1-201ENST00000514522 497 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RNA5SP116-201ENST00000516132 98 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-840P-201ENST00000517275 65 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC018523.1-201ENST00000534211 512 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 UBC-213ENST00000546120 718 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 CR383656.7-201ENST00000548164 174 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC009120.3-201ENST00000563335 499 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL689P-201ENST00000577215 297 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC090287.1-201ENST00000578374 291 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL703P-201ENST00000578485 302 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR3152-201ENST00000579801 74 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR4490-201ENST00000582647 84 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR5006-201ENST00000583027 110 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC087393.3-201ENST00000584971 166 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC007136.1-201ENST00000589141 199 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 KRT7-214ENST00000638501 398 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AP003972.1-201ENST00000625192 5446 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms