Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 Y_RNA.140-201ENST00000363474 103 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 RNU6-884P-201ENST00000363889 107 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 RNU6-723P-201ENST00000383973 107 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 USP9YP13-201ENST00000417797 480 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 USP12PX-201ENST00000432383 1057 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AC010631.1-201ENST00000474150 156 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 RPS29P20-201ENST00000489592 171 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AC113155.1-201ENST00000511141 769 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 MRPS36P2-201ENST00000512569 299 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AL133153.1-201ENST00000557756 303 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 MTND1P8-201ENST00000571424 950 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 RPS3AP23-202ENST00000574601 686 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 MIR4498-201ENST00000577599 66 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AP001004.1-201ENST00000582468 324 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AC011494.1-201ENST00000596454 237 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AL391001.1-201ENST00000602747 715 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AL355877.2-201ENST00000603670 358 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AC013470.4-201ENST00000619978 986 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 MIR203B-201ENST00000636080 86 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 Y_RNA.164-201ENST00000363709 102 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 RN7SKP226-201ENST00000364912 300 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 MIR888-201ENST00000401186 77 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 CCNG1P1-201ENST00000406783 885 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 MIR1305-201ENST00000408300 86 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 RPL21P24-201ENST00000413752 448 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 USP9YP26-201ENST00000421008 661 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 PGBD4P3-201ENST00000440731 581 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 RNA5SP471-201ENST00000516971 106 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 AC136618.2-201ENST00000575091 400 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 AC072039.2-201ENST00000608883 439 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 AC008498.1-201ENST00000613012 531 ntBASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPAP1Q9BWH6 SET-203ENST00000372688 801 ntTSL 2 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 SNORA6-201ENST00000384033 151 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 MIR19A-201ENST00000384878 82 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC023141.4-201ENST00000412031 328 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 MTCO2P21-201ENST00000419780 677 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC098614.2-201ENST00000426040 255 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 RPL7P54-201ENST00000438336 674 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 MTATP6P30-201ENST00000443540 664 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 ELOCP30-201ENST00000447108 299 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 RPL23AP35-201ENST00000451906 501 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 MRPL42P6-201ENST00000486397 371 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC007038.2-201ENST00000608095 740 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC004908.2-201ENST00000609090 574 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC012150.2-201ENST00000621300 544 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 AC097655.1-201ENST00000635075 318 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 CCT4P2-201ENST00000233836 1548 ntBASIC2.43□□□□□ -2.02
RPAP1Q9BWH6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 Y_RNA.226-201ENST00000364337 114 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 SNORA68.1-201ENST00000364537 132 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 RNU6-157P-201ENST00000383957 107 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 RNU6-83P-201ENST00000384568 112 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC119751.3-201ENST00000399720 670 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms