Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.73□□□□□ -1.81
SMOQ99835 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.73□□□□□ -1.81
SMOQ99835 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.73□□□□□ -1.81
SMOQ99835 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.73□□□□□ -1.81
SMOQ99835 AL391261.4-201ENST00000616012 481 ntBASIC3.73□□□□□ -1.81
SMOQ99835 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.73□□□□□ -1.81
SMOQ99835 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMOQ99835 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMOQ99835 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMOQ99835 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMOQ99835 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
SMOQ99835 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.72□□□□□ -1.81
SMOQ99835 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SMOQ99835 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMOQ99835 Y_RNA.384-201ENST00000383909 102 ntBASIC3.72□□□□□ -1.81
SMOQ99835 MIR490-201ENST00000384865 128 ntBASIC3.72□□□□□ -1.81
SMOQ99835 MIR183-201ENST00000384958 110 ntBASIC3.72□□□□□ -1.81
SMOQ99835 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SMOQ99835 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.72□□□□□ -1.81
SMOQ99835 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SMOQ99835 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.72□□□□□ -1.81
SMOQ99835 MIR548K-201ENST00000408406 116 ntBASIC3.72□□□□□ -1.81
SMOQ99835 RPLP0P7-201ENST00000416050 667 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AL592045.1-201ENST00000429867 352 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.72□□□□□ -1.81
SMOQ99835 RPS3AP52-201ENST00000435639 297 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.72□□□□□ -1.81
SMOQ99835 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.72□□□□□ -1.81
SMOQ99835 ANP32BP2-201ENST00000454525 545 ntBASIC3.72□□□□□ -1.81
SMOQ99835 RPL21P41-201ENST00000459863 264 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AP000873.1-201ENST00000463987 400 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AC087884.1-201ENST00000469738 328 ntBASIC3.72□□□□□ -1.81
SMOQ99835 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.72□□□□□ -1.81
SMOQ99835 AC117503.1-201ENST00000472241 394 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AC025518.1-201ENST00000479856 347 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AC078918.1-201ENST00000498515 228 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.72□□□□□ -1.81
SMOQ99835 APOOP4-201ENST00000513530 597 ntBASIC3.72□□□□□ -1.81
SMOQ99835 RNU6-566P-201ENST00000516790 107 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.72□□□□□ -1.81
SMOQ99835 AP005597.4-201ENST00000526762 229 ntBASIC3.72□□□□□ -1.81
SMOQ99835 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
SMOQ99835 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.72□□□□□ -1.81
SMOQ99835 AC002545.1-201ENST00000592511 181 ntBASIC3.72□□□□□ -1.81
SMOQ99835 APOOP1-201ENST00000604695 592 ntBASIC3.72□□□□□ -1.81
SMOQ99835 HMGB1P50-201ENST00000605814 607 ntBASIC3.72□□□□□ -1.81
SMOQ99835 FAM157A-202ENST00000615155 405 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AP003355.3-201ENST00000623465 114 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AL359757.2-201ENST00000624309 274 ntBASIC3.72□□□□□ -1.81
SMOQ99835 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.72□□□□□ -1.81
SMOQ99835 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMOQ99835 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMOQ99835 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.72□□□□□ -1.81
SMOQ99835 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.72□□□□□ -1.81
SMOQ99835 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.72□□□□□ -1.81
SMOQ99835 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
SMOQ99835 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.71□□□□□ -1.82
SMOQ99835 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SMOQ99835 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMOQ99835 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMOQ99835 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.71□□□□□ -1.82
SMOQ99835 RNU6-371P-201ENST00000364283 108 ntBASIC3.71□□□□□ -1.82
SMOQ99835 SNORA7.2-201ENST00000364446 145 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AL391417.1-201ENST00000404100 426 ntBASIC3.71□□□□□ -1.82
SMOQ99835 VN1R36P-201ENST00000414936 291 ntBASIC3.71□□□□□ -1.82
SMOQ99835 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMOQ99835 BTF3L4P3-201ENST00000418879 476 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.71□□□□□ -1.82
SMOQ99835 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.71□□□□□ -1.82
SMOQ99835 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.71□□□□□ -1.82
SMOQ99835 snoU13.22-201ENST00000459428 104 ntBASIC3.71□□□□□ -1.82
SMOQ99835 SNORD19B-201ENST00000459623 84 ntBASIC3.71□□□□□ -1.82
SMOQ99835 VN1R17P-201ENST00000472048 1090 ntBASIC3.71□□□□□ -1.82
SMOQ99835 SUMO2P6-201ENST00000505273 288 ntBASIC3.71□□□□□ -1.82
SMOQ99835 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.71□□□□□ -1.82
SMOQ99835 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.71□□□□□ -1.82
SMOQ99835 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMOQ99835 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.71□□□□□ -1.82
SMOQ99835 SNORA14.1-201ENST00000516113 141 ntBASIC3.71□□□□□ -1.82
SMOQ99835 SCARNA15.2-201ENST00000516409 127 ntBASIC3.71□□□□□ -1.82
SMOQ99835 RNU6-1256P-201ENST00000516539 103 ntBASIC3.71□□□□□ -1.82
SMOQ99835 SNORA25.17-201ENST00000517184 124 ntBASIC3.71□□□□□ -1.82
SMOQ99835 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.71□□□□□ -1.82
SMOQ99835 AP006245.1-201ENST00000522549 120 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AP005639.2-201ENST00000527592 928 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.71□□□□□ -1.82
SMOQ99835 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.71□□□□□ -1.82
SMOQ99835 FRG2DP-202ENST00000566967 323 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.71□□□□□ -1.82
SMOQ99835 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SMOQ99835 MIR5692C1-201ENST00000585309 91 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AC012119.1-201ENST00000603184 222 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AC024220.1-201ENST00000603675 484 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AC098826.3-201ENST00000603823 466 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AC022418.1-201ENST00000624118 445 ntBASIC3.71□□□□□ -1.82
SMOQ99835 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.71□□□□□ -1.82
SMOQ99835 U6.105-201ENST00000637379 88 ntBASIC3.71□□□□□ -1.82
SMOQ99835 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMOQ99835 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMOQ99835 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms