Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PKP4Q99569 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKP4Q99569 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PKP4Q99569 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PKP4Q99569 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
PKP4Q99569 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.21□□□□□ -1.9
PKP4Q99569 RNU6-845P-201ENST00000362578 103 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 Y_RNA.142-201ENST00000363491 102 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 RNU6-799P-201ENST00000363567 107 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 RNU6-996P-201ENST00000365438 107 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 RNU4-48P-201ENST00000365559 182 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 RNU6-39P-201ENST00000384344 107 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 MIR558-201ENST00000384920 94 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 RNA5SP44-201ENST00000410446 133 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.21□□□□□ -1.9
PKP4Q99569 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.21□□□□□ -1.9
PKP4Q99569 RPL7P46-201ENST00000425129 740 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.21□□□□□ -1.9
PKP4Q99569 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.21□□□□□ -1.9
PKP4Q99569 MTND1P14-201ENST00000427400 950 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.21□□□□□ -1.9
PKP4Q99569 RPL36AP53-201ENST00000432891 316 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 CBWD4P-201ENST00000445695 655 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 CACYBPP2-201ENST00000453625 678 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.21□□□□□ -1.9
PKP4Q99569 AC114797.1-201ENST00000514003 728 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.21□□□□□ -1.9
PKP4Q99569 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PKP4Q99569 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.21□□□□□ -1.9
PKP4Q99569 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.21□□□□□ -1.9
PKP4Q99569 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.21□□□□□ -1.9
PKP4Q99569 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.21□□□□□ -1.9
PKP4Q99569 AL133153.1-201ENST00000557756 303 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AL138976.2-201ENST00000563989 694 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AC024220.1-201ENST00000603675 484 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.21□□□□□ -1.9
PKP4Q99569 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.21□□□□□ -1.9
PKP4Q99569 AC009233.1-201ENST00000616477 371 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.21□□□□□ -1.9
PKP4Q99569 SNORD39.4-201ENST00000620099 78 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AC244100.1-202ENST00000621554 382 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.21□□□□□ -1.9
PKP4Q99569 Z83843.1-201ENST00000604070 3685 ntBASIC3.21□□□□□ -1.9
PKP4Q99569 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PKP4Q99569 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.9
PKP4Q99569 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PKP4Q99569 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PKP4Q99569 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PKP4Q99569 NACAP2-201ENST00000318548 624 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 HSPE1P11-201ENST00000339579 310 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 SNORD46.1-201ENST00000364139 104 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 Y_RNA.356-201ENST00000365475 113 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 Y_RNA.367-201ENST00000365544 101 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PKP4Q99569 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
PKP4Q99569 Y_RNA.509-201ENST00000384506 99 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 RNU6-1011P-201ENST00000384668 107 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP4Q99569 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP4Q99569 MED13P1-201ENST00000428342 171 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.2□□□□□ -1.9
PKP4Q99569 OR4K11P-201ENST00000431829 904 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 TAAR7P-201ENST00000436141 242 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 RPL35AP22-201ENST00000436855 335 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP4Q99569 HMGB3P11-201ENST00000440127 604 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP4Q99569 AC006512.1-201ENST00000468816 291 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AL163973.1-201ENST00000484753 577 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 RPL38P4-201ENST00000502376 214 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AC105417.1-201ENST00000514691 285 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 RNU2-10P-201ENST00000516375 211 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 SCARNA15.2-201ENST00000516409 127 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP4Q99569 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.2□□□□□ -1.9
PKP4Q99569 CASP1P1-201ENST00000526345 212 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AL133271.1-201ENST00000538229 291 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP4Q99569 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.2□□□□□ -1.9
PKP4Q99569 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.2□□□□□ -1.9
PKP4Q99569 AC013553.2-201ENST00000604244 589 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AC130324.3-201ENST00000614165 542 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 MIR7975-201ENST00000619350 68 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AC012314.7-201ENST00000619693 93 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP4Q99569 AP003400.5-201ENST00000624827 617 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP4Q99569 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.2□□□□□ -1.9
PKP4Q99569 AC099654.10-201ENST00000640395 161 ntBASIC3.2□□□□□ -1.9
PKP4Q99569 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PKP4Q99569 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.19□□□□□ -1.9
PKP4Q99569 Y_RNA.22-201ENST00000362492 102 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 RNU6-511P-201ENST00000363496 107 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 Y_RNA.535-201ENST00000384612 99 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 MIR454-201ENST00000390180 115 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 RNA5SP252-201ENST00000391131 119 ntBASIC3.19□□□□□ -1.9
PKP4Q99569 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PKP4Q99569 RNU6-516P-201ENST00000411381 104 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms