Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RNU4-17P-201ENST00000365598 141 ntBASIC5.43□□□□□ -1.54
PHOX2BQ99453 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHOX2BQ99453 Y_RNA.498-201ENST00000384460 102 ntBASIC5.43□□□□□ -1.54
PHOX2BQ99453 PPIAP31-201ENST00000405422 495 ntBASIC5.43□□□□□ -1.54
PHOX2BQ99453 AC010095.1-201ENST00000443543 144 ntBASIC5.43□□□□□ -1.54
PHOX2BQ99453 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.43□□□□□ -1.54
PHOX2BQ99453 AL591623.2-201ENST00000449978 222 ntBASIC5.43□□□□□ -1.54
PHOX2BQ99453 RNU6-625P-201ENST00000459412 107 ntBASIC5.43□□□□□ -1.54
PHOX2BQ99453 RPL23AP40-201ENST00000487630 390 ntBASIC5.43□□□□□ -1.54
PHOX2BQ99453 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.43□□□□□ -1.54
PHOX2BQ99453 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.43□□□□□ -1.54
PHOX2BQ99453 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHOX2BQ99453 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PHOX2BQ99453 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHOX2BQ99453 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PHOX2BQ99453 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.43□□□□□ -1.54
PHOX2BQ99453 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.43□□□□□ -1.54
PHOX2BQ99453 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.43□□□□□ -1.54
PHOX2BQ99453 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHOX2BQ99453 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHOX2BQ99453 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHOX2BQ99453 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 RNU1-140P-201ENST00000365040 165 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 MIR544A-201ENST00000384855 91 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 MIR551A-201ENST00000385042 96 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 AL078599.1-201ENST00000402075 293 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 AC010409.1-201ENST00000487382 476 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 RPL30P5-201ENST00000494923 336 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 MIR2117-201ENST00000516780 80 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 AC018448.1-201ENST00000552843 316 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 AL356575.1-201ENST00000603008 283 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 Y_RNA.778-201ENST00000620203 90 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 U2.21-201ENST00000637295 81 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 AC074101.1-201ENST00000637861 241 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 Z73965.1-201ENST00000623412 2297 ntBASIC5.42□□□□□ -1.54
PHOX2BQ99453 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHOX2BQ99453 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHOX2BQ99453 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHOX2BQ99453 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.42□□□□□ -1.54
PHOX2BQ99453 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHOX2BQ99453 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHOX2BQ99453 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHOX2BQ99453 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHOX2BQ99453 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHOX2BQ99453 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC006484.1-201ENST00000435086 1884 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC099654.7-201ENST00000635788 2127 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 AP004607.3-201ENST00000530354 3915 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 MTND5P35-201ENST00000557537 1720 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHOX2BQ99453 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 RNU6-1272P-201ENST00000362776 107 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 RNU4-80P-201ENST00000363200 141 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 RNU1-73P-201ENST00000383971 164 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 MIR320B2-201ENST00000408479 138 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 HMGN2P27-201ENST00000427352 270 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC009237.7-201ENST00000447357 229 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 AL121594.1-201ENST00000475906 575 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 SCARNA13-201ENST00000516672 275 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 IGLV3-24-201ENST00000517477 197 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC106785.1-201ENST00000565935 262 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC009127.3-201ENST00000570531 403 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC060780.2-201ENST00000589047 198 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC023043.4-201ENST00000612081 449 ntBASIC5.41□□□□□ -1.54
PHOX2BQ99453 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHOX2BQ99453 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHOX2BQ99453 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHOX2BQ99453 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PHOX2BQ99453 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PHOX2BQ99453 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PHOX2BQ99453 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PHOX2BQ99453 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PHOX2BQ99453 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PHOX2BQ99453 AP001029.2-203ENST00000589795 4910 ntBASIC5.4□□□□□ -1.54
PHOX2BQ99453 RNU6-873P-201ENST00000363833 107 ntBASIC5.4□□□□□ -1.54
PHOX2BQ99453 RNU6-245P-201ENST00000384020 107 ntBASIC5.4□□□□□ -1.54
PHOX2BQ99453 RNU6-217P-201ENST00000384164 104 ntBASIC5.4□□□□□ -1.54
PHOX2BQ99453 SNORA11.1-201ENST00000408133 129 ntBASIC5.4□□□□□ -1.54
PHOX2BQ99453 AL160275.2-201ENST00000412010 394 ntBASIC5.4□□□□□ -1.54
PHOX2BQ99453 AC138761.5-201ENST00000433967 325 ntBASIC5.4□□□□□ -1.54
PHOX2BQ99453 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.4□□□□□ -1.54
PHOX2BQ99453 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.4□□□□□ -1.54
PHOX2BQ99453 AC012308.1-201ENST00000451232 178 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms