Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.15□□□□□ -1.74
PTCHD1Q96NR3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PTCHD1Q96NR3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
PTCHD1Q96NR3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTCHD1Q96NR3 AL133243.3-201ENST00000617415 3004 ntBASIC4.15□□□□□ -1.74
PTCHD1Q96NR3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
PTCHD1Q96NR3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 SNORD14B-201ENST00000364533 90 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 Y_RNA.276-201ENST00000364732 109 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 MIR521-1-201ENST00000384902 87 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AL356968.1-201ENST00000416622 474 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 TOMM22P1-201ENST00000418578 312 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 PGBD4P6-201ENST00000421501 610 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 RPS29P17-201ENST00000430795 166 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 RPS3AP46-201ENST00000448352 682 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 NDUFB1P2-201ENST00000449477 176 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AC133473.1-201ENST00000455173 299 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 RPL21P13-201ENST00000488305 481 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 RNU6-408P-201ENST00000515910 100 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AC144568.1-201ENST00000520139 137 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AC004584.2-201ENST00000570407 410 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AC125232.2-201ENST00000592457 143 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AC078899.3-201ENST00000599065 212 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 MTND4LP5-201ENST00000605152 292 ntBASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PTCHD1Q96NR3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AC007685.1-201ENST00000329806 452 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 MIR331-201ENST00000362302 94 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RNU1-20P-201ENST00000363314 162 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RNA5SP509-201ENST00000364577 119 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 Y_RNA.257-201ENST00000364596 102 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RNU6-827P-201ENST00000365553 106 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 Y_RNA.447-201ENST00000384184 113 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RNU6-472P-201ENST00000384299 107 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 Y_RNA.526-201ENST00000384572 110 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 Y_RNA.551-201ENST00000384661 102 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AL022722.2-201ENST00000402519 180 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 U3.42-201ENST00000408746 214 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RN7SKP167-201ENST00000411047 285 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 Y_RNA.623-201ENST00000411128 95 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 NDUFB4P7-201ENST00000423198 363 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AL356867.1-201ENST00000429623 299 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RPS24P6-201ENST00000452670 400 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AL583843.1-201ENST00000456070 346 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 snoU13.24-201ENST00000458998 104 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 U8.21-201ENST00000459536 136 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RN7SL98P-201ENST00000462271 300 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AF213884.1-201ENST00000488102 463 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RN7SL812P-201ENST00000493791 279 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AC107222.1-201ENST00000510899 637 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RNU2-53P-201ENST00000516257 147 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RNA5SP290-201ENST00000517133 127 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 IGHV3-76-201ENST00000522465 295 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 RPL21P7-201ENST00000557463 483 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AC079587.1-201ENST00000603846 277 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AC006023.2-201ENST00000609916 167 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 MIR378J-201ENST00000611988 109 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AC004852.3-201ENST00000614131 326 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 HMGB1P24-202ENST00000615653 685 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 uc_338.13-201ENST00000618243 179 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 MIR6891-201ENST00000618788 93 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD1Q96NR3 ZNF299P-201ENST00000406845 1804 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms