Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RPL7P2-201ENST00000427639 268 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 TIMM9P3-201ENST00000428659 274 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AL627311.1-201ENST00000431514 115 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 OR4C10P-201ENST00000434991 931 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AL360271.2-201ENST00000447710 161 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 PSPHP1-201ENST00000450062 261 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 NIPA2P5-201ENST00000452282 464 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AC027673.1-201ENST00000456245 405 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AC010460.1-201ENST00000507087 466 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 MRPS36P2-201ENST00000512569 299 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AC104136.1-201ENST00000512969 394 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 RNA5SP315-201ENST00000516340 116 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 RN7SKP219-201ENST00000516825 296 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 RNA5SP312-201ENST00000517068 116 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AP001893.2-201ENST00000526949 202 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AP005435.4-201ENST00000529514 284 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 OR5B10P-201ENST00000532869 642 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AL121821.2-201ENST00000556081 394 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AC007224.1-201ENST00000564410 144 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AC136624.4-201ENST00000573044 370 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AL645944.1-201ENST00000603857 493 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AP001330.5-201ENST00000607176 411 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 MIR6867-201ENST00000610636 67 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 AC008264.2-201ENST00000610193 3731 ntBASIC2.96□□□□□ -1.94
CMTM3Q96MX0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.96□□□□□ -1.94
CMTM3Q96MX0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 Y_RNA.481-201ENST00000384373 102 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 MIR518D-201ENST00000385014 87 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AL122016.1-201ENST00000403365 367 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AL591416.1-201ENST00000404015 867 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AL117339.2-201ENST00000430475 180 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC091286.1-201ENST00000431233 461 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC000111.3-201ENST00000433478 193 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AL161651.1-201ENST00000440882 223 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AL133162.1-201ENST00000463228 453 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 SRRM1P2-201ENST00000464531 1192 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC068587.1-201ENST00000483613 781 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 FAM92A1P2-202ENST00000504766 877 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 RNU1-143P-201ENST00000516296 146 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 RNU6-720P-201ENST00000516363 108 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC022880.1-201ENST00000534017 973 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC234778.2-201ENST00000566241 354 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 MTATP6P3-201ENST00000581686 676 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 MIR4697-201ENST00000582977 78 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC011471.1-201ENST00000585766 187 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC005261.5-201ENST00000596280 355 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC087045.1-201ENST00000605856 382 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 U1.23-201ENST00000610293 146 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC083809.1-201ENST00000615051 472 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 RNU1-68P-201ENST00000615382 146 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 U1.39-201ENST00000621562 146 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AL359880.1-201ENST00000621879 266 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC004777.1-201ENST00000624317 287 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 AC099654.12-201ENST00000639868 649 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 CDC27P3-201ENST00000635418 1910 ntBASIC2.95□□□□□ -1.94
CMTM3Q96MX0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CMTM3Q96MX0 SNORD3E-201ENST00000362899 217 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 SNORA51.4-201ENST00000364993 124 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 RNU6-996P-201ENST00000365438 107 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CMTM3Q96MX0 Y_RNA.409-201ENST00000383990 98 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 RNU6-517P-201ENST00000384362 110 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 RNU1-13P-201ENST00000384499 162 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 RNU6-903P-201ENST00000391270 109 ntBASIC2.94□□□□□ -1.94
CMTM3Q96MX0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms