Protein–RNA interactions for Protein: Q96EX2

RNFT2, RING finger and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2Q96EX2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.21□□□□□ -1.9
RNFT2Q96EX2 AC106785.1-201ENST00000565935 262 ntBASIC3.21□□□□□ -1.9
RNFT2Q96EX2 MTCO3P24-201ENST00000572729 782 ntBASIC3.21□□□□□ -1.9
RNFT2Q96EX2 MIR3941-201ENST00000582572 103 ntBASIC3.21□□□□□ -1.9
RNFT2Q96EX2 AC007938.3-201ENST00000604965 623 ntBASIC3.21□□□□□ -1.9
RNFT2Q96EX2 AL020991.1-201ENST00000612314 373 ntBASIC3.21□□□□□ -1.9
RNFT2Q96EX2 MIR3662-201ENST00000637030 95 ntBASIC3.21□□□□□ -1.9
RNFT2Q96EX2 AC024614.3-201ENST00000637860 256 ntBASIC3.21□□□□□ -1.9
RNFT2Q96EX2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNFT2Q96EX2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC004520.1-201ENST00000608362 1413 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 RNU1-75P-201ENST00000347264 129 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 MIR412-201ENST00000362142 91 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 Y_RNA.231-201ENST00000364358 102 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 RNU4-66P-201ENST00000365199 138 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 Y_RNA.399-201ENST00000383955 105 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 RNU1-73P-201ENST00000383971 164 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 RNU6-198P-201ENST00000384258 104 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 NDUFS5P4-201ENST00000412983 318 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC098614.2-201ENST00000426040 255 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 HMGB1P9-201ENST00000429856 646 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC122718.1-201ENST00000439448 744 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AL357552.1-201ENST00000445254 415 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AL360271.2-201ENST00000447710 161 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 RPL31P58-201ENST00000469001 379 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 RN7SL442P-201ENST00000473804 320 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 HMGB1P30-201ENST00000492455 606 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC009901.1-201ENST00000506703 541 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC112206.3-201ENST00000514578 389 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 RNU1-103P-201ENST00000516502 125 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 SNORD59.2-201ENST00000516873 68 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 BNIP3P6-201ENST00000549284 499 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AL391261.3-201ENST00000557194 520 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 MTCO3P23-201ENST00000561363 289 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 MIR4286-201ENST00000580651 93 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC010525.2-201ENST00000590920 195 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC012468.1-201ENST00000604888 430 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 RMST_3.1-201ENST00000611651 109 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
RNFT2Q96EX2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT2Q96EX2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 RNU6-82P-201ENST00000363970 107 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 RNU4-20P-201ENST00000365601 151 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 RNU6-1179P-201ENST00000384667 107 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 SNORA40C-201ENST00000391285 128 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 SRIP2-201ENST00000428470 166 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AL117339.2-201ENST00000430475 180 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AC073063.1-201ENST00000434352 607 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AL714022.1-201ENST00000439897 151 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 RPL26P9-201ENST00000457466 433 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AC034236.1-201ENST00000469891 373 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 RPL21P99-201ENST00000480369 423 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AC079140.5-201ENST00000507882 310 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 SNORA70.19-201ENST00000516717 90 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 SNORA31.19-201ENST00000517079 126 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 NACAP3-201ENST00000552100 481 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AL133241.1-201ENST00000556832 487 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AC234778.2-201ENST00000566241 354 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AL606490.9-201ENST00000603331 271 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 FP236240.3-201ENST00000623061 327 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AC022418.1-201ENST00000624118 445 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AP003400.5-201ENST00000624827 617 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 RNA5SP196-201ENST00000625967 102 ntBASIC3.19□□□□□ -1.9
RNFT2Q96EX2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.19□□□□□ -1.9
RNFT2Q96EX2 AL513302.2-201ENST00000562313 1842 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms