Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 OR5J1P-201ENST00000313544 939 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 RNU6-512P-201ENST00000364438 103 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 RNU6-946P-201ENST00000383878 107 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 RNY3P10-201ENST00000384764 102 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 RPS3AP36-201ENST00000398190 775 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL138885.1-201ENST00000405921 675 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL513475.1-201ENST00000406602 315 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 RNU6-193P-201ENST00000410977 107 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC096649.2-201ENST00000416186 393 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 BTF3L4P3-201ENST00000418879 476 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL109913.1-201ENST00000421173 514 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL358075.3-201ENST00000426289 226 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC009414.1-201ENST00000427200 443 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 RPS24P1-201ENST00000438550 371 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 BRK1P2-201ENST00000442875 223 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL136380.1-201ENST00000447970 162 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 SNRPGP9-201ENST00000456025 225 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC107626.1-201ENST00000471084 183 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 RPL7P49-201ENST00000471402 708 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 RNU6-677P-201ENST00000516914 101 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 MTND2P38-201ENST00000522536 667 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 PRELID2P1-201ENST00000552837 301 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC121758.2-201ENST00000553271 193 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 MIR4444-1-201ENST00000581696 74 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 MIR4444-2-201ENST00000584390 74 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC005498.1-201ENST00000592125 465 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC008739.2-201ENST00000597006 317 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 BNIP3P33-201ENST00000598912 569 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 YPEL5P2-201ENST00000605553 359 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 CU459211.1-201ENST00000635667 749 ntBASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RPUSD4Q96CM3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 RNA5SP374-201ENST00000362939 125 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 U3.4-201ENST00000363352 213 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 RNU6-750P-201ENST00000390946 107 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 RNA5SP354-201ENST00000391247 136 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 MTND3P17-201ENST00000416968 344 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC009518.2-201ENST00000418056 731 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 RPL36AP53-201ENST00000432891 316 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 RPS15AP5-201ENST00000436276 388 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC003071.1-201ENST00000451219 789 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 BX510359.1-201ENST00000456973 237 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC091826.1-201ENST00000514065 313 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 RNU1-103P-201ENST00000516502 125 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 Y_RNA.688-201ENST00000516565 95 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC022616.3-201ENST00000523940 148 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 MIR3167-201ENST00000579623 85 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC024153.1-201ENST00000603103 365 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 SRGNP1-201ENST00000603392 451 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 BNIP3P9-201ENST00000603714 553 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AL645944.1-201ENST00000603857 493 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC007938.3-201ENST00000604965 623 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC109347.2-201ENST00000610220 349 ntBASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.11□□□□□ -2.07
RPUSD4Q96CM3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.1□□□□□ -2.07
RPUSD4Q96CM3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.1□□□□□ -2.07
RPUSD4Q96CM3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
RPUSD4Q96CM3 NACAP2-201ENST00000318548 624 ntBASIC2.1□□□□□ -2.07
RPUSD4Q96CM3 RN7SKP226-201ENST00000364912 300 ntBASIC2.1□□□□□ -2.07
RPUSD4Q96CM3 RNU6-297P-201ENST00000384636 107 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms