Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AP003497.1-201ENST00000528472 562 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RPS3AP4-201ENST00000555161 764 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC090888.2-201ENST00000559765 1144 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC010928.2-201ENST00000588017 287 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC012669.1-201ENST00000603209 283 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AP001330.4-201ENST00000604350 154 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL158211.4-201ENST00000606988 584 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC091304.6-201ENST00000619761 202 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 SGO1P2-201ENST00000429458 1589 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RNU6-661P-201ENST00000362409 107 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RNU6-744P-201ENST00000365557 107 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RNU6-1316P-201ENST00000384242 108 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RNU2-43P-201ENST00000410306 190 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 HSPE1P1-201ENST00000421494 318 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC092447.3-201ENST00000426027 686 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 LSM1P1-201ENST00000438629 273 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 UBE2D3P4-201ENST00000441973 436 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC005297.2-201ENST00000450430 606 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RPS24P6-201ENST00000452670 400 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RPL37P25-201ENST00000507308 276 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RNU6-528P-201ENST00000516926 100 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC007834.2-201ENST00000536310 343 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL163153.1-201ENST00000554223 283 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL109653.1-201ENST00000603091 248 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC013444.2-201ENST00000603317 787 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL357080.1-201ENST00000617394 239 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL353748.2-201ENST00000622148 471 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC040168.1-201ENST00000623594 991 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC091953.2-201ENST00000623979 160 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 MTND4P23-201ENST00000447723 1363 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 RNU6-853P-201ENST00000364306 107 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 RNU6-1197P-201ENST00000391183 107 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AL590084.2-201ENST00000401481 382 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 RNA5SP56-201ENST00000410277 118 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 RPL21P66-201ENST00000426566 466 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 RPL7P34-201ENST00000433316 712 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 HMGB1P12-201ENST00000438594 598 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 MTND1P30-201ENST00000441241 901 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC092798.1-201ENST00000458542 409 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 RPL21P104-201ENST00000464143 478 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 RPL23AP41-201ENST00000484754 458 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC135721.1-201ENST00000497954 479 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 RAC1P5-201ENST00000512182 576 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC022861.1-201ENST00000522981 663 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AP004247.1-201ENST00000531556 1289 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 SYF2P1-201ENST00000550658 413 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC010546.1-201ENST00000569391 485 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 MIR3915-201ENST00000578518 97 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 CLIC4P2-201ENST00000601934 717 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC106791.2-201ENST00000604680 391 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC024560.3-201ENST00000608482 349 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC004067.1-201ENST00000608733 700 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 AC019226.2-201ENST00000625973 424 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 PCMTD1P7-201ENST00000634506 357 ntBASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
SHROOM3Q8TF72 UBE2L2-201ENST00000254302 429 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RNU6-600P-201ENST00000362524 99 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 SNORA51.2-201ENST00000364595 132 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RNU6-621P-201ENST00000364752 109 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RNU6-1074P-201ENST00000383995 104 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 MIR493-201ENST00000385254 89 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RN7SKP101-201ENST00000411376 320 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 AL359704.1-201ENST00000411586 781 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 RPL21P32-201ENST00000419877 477 ntBASIC1.83□□□□□ -2.12
SHROOM3Q8TF72 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms