Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC090821.2-201ENST00000523552 176 ntBASIC1.43□□□□□ -2.18
RTL9Q8NET4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.43□□□□□ -2.18
RTL9Q8NET4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.43□□□□□ -2.18
RTL9Q8NET4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.43□□□□□ -2.18
RTL9Q8NET4 AL022067.1-201ENST00000602426 454 ntBASIC1.43□□□□□ -2.18
RTL9Q8NET4 BX322635.1-201ENST00000605804 496 ntBASIC1.43□□□□□ -2.18
RTL9Q8NET4 AC008498.1-201ENST00000613012 531 ntBASIC1.43□□□□□ -2.18
RTL9Q8NET4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RTL9Q8NET4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
RTL9Q8NET4 RNA5SP125-201ENST00000364843 120 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RTL9Q8NET4 MIR218-1-201ENST00000384999 110 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AC023141.4-201ENST00000412031 328 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 HMGB1P49-201ENST00000418882 569 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AC093422.3-201ENST00000428506 305 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.42□□□□□ -2.18
RTL9Q8NET4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.42□□□□□ -2.18
RTL9Q8NET4 AC118469.1-201ENST00000442943 488 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 NDUFA5P7-201ENST00000452914 242 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AC027575.1-201ENST00000481064 460 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AC008837.2-201ENST00000513076 418 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 RNU6-416P-201ENST00000516265 103 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AP005660.1-201ENST00000522972 293 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AC095057.3-201ENST00000567102 1157 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.42□□□□□ -2.18
RTL9Q8NET4 AC007785.2-201ENST00000598627 1916 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AL671309.1-201ENST00000603750 544 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 DUXAP10-204ENST00000612052 616 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.42□□□□□ -2.18
RTL9Q8NET4 AC068700.1-201ENST00000565862 3754 ntBASIC1.42□□□□□ -2.18
RTL9Q8NET4 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
RTL9Q8NET4 MIR613-201ENST00000385248 95 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 RNA5SP450-201ENST00000411206 102 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 MTCO3P46-201ENST00000425787 232 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 AC015922.2-201ENST00000435593 184 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 AP000949.1-201ENST00000438328 629 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.41□□□□□ -2.18
RTL9Q8NET4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.41□□□□□ -2.18
RTL9Q8NET4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.41□□□□□ -2.18
RTL9Q8NET4 FABP5P5-201ENST00000515537 406 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 RN7SKP49-201ENST00000516675 260 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.41□□□□□ -2.18
RTL9Q8NET4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.41□□□□□ -2.18
RTL9Q8NET4 AC025918.2-201ENST00000558683 763 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.41□□□□□ -2.18
RTL9Q8NET4 AC093510.2-201ENST00000562820 896 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 BPTFP1-201ENST00000579209 492 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.41□□□□□ -2.18
RTL9Q8NET4 AL021997.1-201ENST00000605757 193 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.41□□□□□ -2.18
RTL9Q8NET4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.41□□□□□ -2.18
RTL9Q8NET4 AP002791.1-201ENST00000623291 381 ntBASIC1.41□□□□□ -2.18
RTL9Q8NET4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 RNU6-1083P-201ENST00000384022 107 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 AC016769.3-201ENST00000396562 315 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 MIR934-201ENST00000401241 83 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 RNU2-49P-201ENST00000410666 184 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 AL158823.1-201ENST00000418441 478 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RTL9Q8NET4 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 AP1S2P1-201ENST00000457344 379 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 TPT1P8-201ENST00000510120 555 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 MTND4LP5-201ENST00000605152 292 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 AC080013.4-201ENST00000607624 649 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 AC025048.6-202ENST00000627667 438 ntBASIC1.4□□□□□ -2.19
RTL9Q8NET4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RTL9Q8NET4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
RTL9Q8NET4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
RTL9Q8NET4 RNU6-115P-201ENST00000364310 107 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 RNU6-750P-201ENST00000390946 107 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 HMGB1P17-201ENST00000403495 628 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.39□□□□□ -2.19
RTL9Q8NET4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.39□□□□□ -2.19
RTL9Q8NET4 AC018630.2-202ENST00000422992 927 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 AC092047.1-201ENST00000424997 240 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 RPS15AP5-201ENST00000436276 388 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 AC092170.1-201ENST00000440211 356 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 AL078601.1-201ENST00000444542 271 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 AL929288.2-201ENST00000446368 407 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.39□□□□□ -2.19
RTL9Q8NET4 AC005410.1-202ENST00000460347 485 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 LARP1BP2-201ENST00000486594 519 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 AL049874.1-201ENST00000489560 388 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RTL9Q8NET4 AC008834.1-201ENST00000511612 175 ntBASIC1.39□□□□□ -2.19
RTL9Q8NET4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms