Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 RNY4P14-201ENST00000363656 96 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 RNU6-190P-201ENST00000384154 102 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 ELOCP14-201ENST00000428070 331 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 HMGB1P27-201ENST00000431429 603 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 TAAR7P-201ENST00000436141 242 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 ELOCP7-201ENST00000439968 331 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 FGF7P6-202ENST00000451282 293 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 RPS29P15-201ENST00000458329 171 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 RNU6-953P-201ENST00000459154 107 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AC087588.1-201ENST00000462203 316 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 RPL21P8-201ENST00000465083 535 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AC006512.1-201ENST00000468816 291 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 RPS29P2-201ENST00000479278 136 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 RPL36AP51-201ENST00000487216 318 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 TTC39CP1-201ENST00000512513 755 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 MIR4775-201ENST00000581168 75 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AC174048.1-201ENST00000603389 144 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 AP001486.3-201ENST00000615334 372 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 MIR3688-2-201ENST00000636963 87 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 MIR1321-201ENST00000637766 79 ntBASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PCDH20Q8N6Y1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 FAM35CP-201ENST00000554755 2470 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC090740.1-201ENST00000623193 2262 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 API5P2-201ENST00000397055 1498 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RNU6-1090P-201ENST00000364065 94 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 SNORA71.1-201ENST00000364523 117 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RNU6-741P-201ENST00000383889 107 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RNU6-483P-201ENST00000384088 108 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 SNORA54-201ENST00000384281 123 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 MIR128-1-201ENST00000384921 82 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 SNORA48.2-201ENST00000390926 124 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AL591416.1-201ENST00000404015 867 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RN7SKP220-201ENST00000410611 288 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 USP9YP27-201ENST00000418455 438 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC016691.1-201ENST00000441321 413 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC009237.8-201ENST00000445492 379 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RNU6-261P-201ENST00000459506 102 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 S100A11P2-201ENST00000467589 312 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RPS23P3-201ENST00000470993 430 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RNU1-61P-201ENST00000516107 151 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RNU6-1281P-201ENST00000516223 105 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 RNU6-677P-201ENST00000516914 101 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC034105.3-201ENST00000565294 442 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC008752.3-201ENST00000588113 712 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AL133393.1-201ENST00000603277 287 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AL390240.1-201ENST00000612950 384 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AC034102.8-201ENST00000615146 484 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 AL136164.4-201ENST00000625013 2135 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 U6.114-201ENST00000636407 96 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 MTND5P42-201ENST00000637720 498 ntBASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PCDH20Q8N6Y1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 Y_RNA.256-201ENST00000364594 104 ntBASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 RNU1-140P-201ENST00000365040 165 ntBASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 SNORD67-201ENST00000390833 111 ntBASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 SAR1AP2-201ENST00000392696 594 ntBASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 AL139397.2-201ENST00000404529 772 ntBASIC3.11□□□□□ -1.91
PCDH20Q8N6Y1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms