Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 RNU6-677P-201ENST00000516914 101 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.96□□□□□ -1.94
CPSF7Q8N684 OR5B19P-201ENST00000531766 928 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.96□□□□□ -1.94
CPSF7Q8N684 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.96□□□□□ -1.94
CPSF7Q8N684 EIF4BP1-201ENST00000554881 351 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 TRAV28-201ENST00000557548 323 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 LARP7P3-201ENST00000579888 337 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 AC080078.2-201ENST00000603766 501 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 AC025449.1-201ENST00000603896 529 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 AC068831.7-201ENST00000616954 363 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 AC090617.7-201ENST00000623952 126 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.96□□□□□ -1.94
CPSF7Q8N684 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CPSF7Q8N684 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CPSF7Q8N684 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CPSF7Q8N684 TPTE2P4-201ENST00000258589 1605 ntBASIC2.96□□□□□ -1.94
CPSF7Q8N684 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
CPSF7Q8N684 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.94
CPSF7Q8N684 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.96□□□□□ -1.94
CPSF7Q8N684 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.96□□□□□ -1.94
CPSF7Q8N684 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CPSF7Q8N684 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CPSF7Q8N684 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CPSF7Q8N684 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 UBE2L2-201ENST00000254302 429 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 RNU6-1120P-201ENST00000362988 108 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 RNU6-1167P-201ENST00000363227 94 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 RNU6-179P-201ENST00000363350 107 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 RNU6-190P-201ENST00000384154 102 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 SNORA24.1-201ENST00000384401 135 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 Y_RNA.505-201ENST00000384489 102 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 Y_RNA.516-201ENST00000384541 124 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 SNORA1.3-201ENST00000384676 136 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CPSF7Q8N684 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CPSF7Q8N684 AF274854.1-201ENST00000413236 615 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AL451074.5-201ENST00000415894 435 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 Z82210.1-201ENST00000440037 231 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 PSPHP1-201ENST00000450062 261 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC093899.1-201ENST00000457984 376 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC108078.2-201ENST00000510750 236 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 RPL23AP94-201ENST00000512518 302 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 RNA5SP471-201ENST00000516971 106 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 AL359212.1-201ENST00000556608 614 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC006504.3-201ENST00000586818 523 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 DEFB131E-202ENST00000602581 683 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC098826.3-201ENST00000603823 466 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC008536.2-201ENST00000607284 349 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CPSF7Q8N684 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 MIR6076-201ENST00000617521 113 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AC093648.1-201ENST00000623546 606 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CPSF7Q8N684 AL049641.1-201ENST00000441055 1948 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 AL136164.4-201ENST00000625013 2135 ntBASIC2.95□□□□□ -1.94
CPSF7Q8N684 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CPSF7Q8N684 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CPSF7Q8N684 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CPSF7Q8N684 RNU6-512P-201ENST00000364438 103 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 MTCO3P40-201ENST00000392516 676 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AL590004.2-201ENST00000404787 371 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AL354719.1-201ENST00000406535 843 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 MIR1289-1-201ENST00000408836 144 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 ZNF885P-201ENST00000420174 1098 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 COTL1P1-201ENST00000422309 375 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 AL590664.1-201ENST00000448065 339 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 AL135752.1-201ENST00000479477 471 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 RPL30P14-201ENST00000482744 348 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC006445.2-201ENST00000510061 472 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 SNORD27.1-201ENST00000516319 72 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 RNU6-314P-201ENST00000516574 104 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 RNU6-1282P-201ENST00000516735 96 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 RNA5SP290-201ENST00000517133 127 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CPSF7Q8N684 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms