Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RPL7P23-201ENST00000493874 747 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 RPL39P5-202ENST00000512505 151 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 RNU6-1137P-201ENST00000517073 99 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 AC018630.1-201ENST00000541376 925 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 MTCO3P23-201ENST00000561363 289 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 AL355812.1-201ENST00000603215 216 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 AC007938.3-201ENST00000604965 623 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 AL138726.1-201ENST00000614873 333 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 MIR6130-201ENST00000619419 109 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 MIR8057-201ENST00000620957 69 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 AL133383.2-201ENST00000622958 2336 ntBASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC44A3Q8N4M1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 RNU6-1115P-201ENST00000362490 106 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 Y_RNA.148-201ENST00000363557 117 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 SNORD116-11-201ENST00000383882 92 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 Y_RNA.482-201ENST00000384377 111 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 MT-TC-201ENST00000387405 66 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 SNORA16.2-201ENST00000390991 127 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AL139396.1-201ENST00000421137 167 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC079140.5-201ENST00000507882 310 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 HIGD1AP13-201ENST00000509878 289 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC138761.3-201ENST00000579993 334 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC067852.4-201ENST00000590314 478 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AL670379.6-201ENST00000603753 252 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC008162.1-201ENST00000604718 254 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AL670379.1-201ENST00000604752 252 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AL670379.5-201ENST00000605253 252 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AL670379.8-201ENST00000605353 252 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AL670379.7-201ENST00000605823 252 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 MIR7851-201ENST00000610611 160 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 AC012409.4-201ENST00000612923 249 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 MTND5P10-201ENST00000603719 1809 ntBASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A3Q8N4M1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 GABPAP-201ENST00000419271 1356 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 MTCO1P24-201ENST00000515438 1558 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 MTND5P19-201ENST00000424872 1794 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 RNA5SP322-201ENST00000363617 119 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 Y_RNA.399-201ENST00000383955 105 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 MIR135A2-201ENST00000384854 100 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 RNA5SP424-201ENST00000390988 115 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AL356057.3-201ENST00000402607 340 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 CALM2P2-201ENST00000428512 440 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 Y_RNA.653-201ENST00000459091 95 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AP000926.1-201ENST00000479573 241 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 RPS27P27-201ENST00000498779 255 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AC008526.1-201ENST00000509149 338 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 FTH1P9-201ENST00000513251 355 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 RNU2-27P-201ENST00000516185 142 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 MIR2114-201ENST00000516645 80 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 Y_RNA.720-201ENST00000517166 92 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 RN7SKP234-201ENST00000517173 224 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.77□□□□□ -1.81
SLC44A3Q8N4M1 RPL23AP84-201ENST00000571193 464 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms