Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 MIR411-201ENST00000362239 96 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 Y_RNA.44-201ENST00000362676 108 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 SNORA66-201ENST00000384792 133 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 UBA52P6-201ENST00000399822 382 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 RN7SKP106-201ENST00000410832 272 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 DDX39BP1-205ENST00000422507 192 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AL390119.1-201ENST00000440329 312 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 HMGB3P8-201ENST00000449709 577 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 RPL7P49-201ENST00000471402 708 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AC092754.1-201ENST00000472975 479 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 RN7SL346P-201ENST00000491561 294 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AC044860.2-201ENST00000561005 179 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 MIR5571-201ENST00000577998 113 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 RN7SL435P-201ENST00000584418 282 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AL590392.1-201ENST00000604960 446 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AC037487.3-201ENST00000606668 112 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 MIR6837-201ENST00000620884 64 ntBASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 AC023421.1-201ENST00000590535 1785 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 MAPK10-320ENST00000641462 6696 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 SNORA31-201ENST00000362607 130 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 RNA5SP515-201ENST00000364570 118 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 RNU1-100P-201ENST00000365255 165 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 SNORD116-20-201ENST00000384529 92 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 SNORD12B-201ENST00000410433 91 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 AL390729.2-201ENST00000416137 156 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 OR2AM1P-201ENST00000422137 422 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 AC007969.2-201ENST00000441891 191 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 AP000873.1-201ENST00000463987 400 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 AC100832.1-201ENST00000471945 383 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 RN7SL814P-201ENST00000487715 300 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 SNORA25.14-201ENST00000516481 132 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 RNU2-31P-201ENST00000516954 155 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 AC027288.2-201ENST00000553028 243 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 MIR8080-201ENST00000622224 89 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 AC007656.2-201ENST00000624902 4547 ntBASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.88□□□□□ -1.63
DEPDC4Q8N2C3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-545P-201ENST00000362681 104 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 RNU1-35P-201ENST00000362782 153 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 SNORD115-8-201ENST00000363856 82 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 SNORD115-38-201ENST00000365037 82 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-541P-201ENST00000384709 110 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AL078599.1-201ENST00000402075 293 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC074117.2-201ENST00000417130 397 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC125238.1-201ENST00000448842 249 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 SSXP4-201ENST00000451349 245 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC091874.1-201ENST00000511402 339 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC005255.1-201ENST00000593748 216 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 Z83818.1-201ENST00000603584 150 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC019159.1-201ENST00000605094 187 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AL138963.2-201ENST00000605137 226 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC132068.1-201ENST00000623805 459 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 SNORA43.4-201ENST00000629559 138 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC000123.3-201ENST00000624029 4975 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 AC073073.2-201ENST00000609827 2578 ntBASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.87□□□□□ -1.63
DEPDC4Q8N2C3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
DEPDC4Q8N2C3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms