Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE4Q8N205 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC118273.1-201ENST00000525324 3006 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SYNE4Q8N205 AL139276.1-201ENST00000311910 1001 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SYNE4Q8N205 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 RNU6-1252P-201ENST00000363054 104 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 RNU6-511P-201ENST00000363496 107 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 Y_RNA.145-201ENST00000363527 102 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 RNU6-1029P-201ENST00000384109 107 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 Y_RNA.445-201ENST00000384168 102 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 Y_RNA.459-201ENST00000384251 102 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 RNU6-821P-201ENST00000390995 107 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AL356057.3-201ENST00000402607 340 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AL138885.1-201ENST00000405921 675 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 MIR1250-201ENST00000408098 113 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC092447.6-201ENST00000414578 210 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 IPO7P1-201ENST00000442031 636 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 RNU6-864P-201ENST00000516256 108 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 HMGB1P41-201ENST00000520234 440 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AP003385.6-201ENST00000531603 374 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC093012.1-202ENST00000549403 582 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 HIGD1AP1-201ENST00000550979 275 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 AL360157.1-201ENST00000565962 87 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SYNE4Q8N205 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 AP001330.4-201ENST00000604350 154 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC019193.3-201ENST00000609144 554 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC013412.1-201ENST00000610687 192 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 RNVU1-4-201ENST00000612985 164 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 AL137790.1-201ENST00000634283 177 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 PNPT1P2-201ENST00000456768 2050 ntBASIC4.12□□□□□ -1.75
SYNE4Q8N205 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SYNE4Q8N205 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE4Q8N205 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 TAB3P1-202ENST00000452645 1634 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE4Q8N205 AC244517.1-201ENST00000606030 2086 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 Y_RNA.133-201ENST00000363428 110 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 AL606923.1-201ENST00000406616 190 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 Y_RNA.605-201ENST00000410577 105 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 RNU4-78P-201ENST00000410940 126 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 AC137499.1-201ENST00000427602 88 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 RPL23AP69-201ENST00000431134 458 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 MTND1P9-201ENST00000453775 944 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 SNORD121B-201ENST00000458838 81 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 RNU7-152P-201ENST00000458982 64 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 RPL21P103-201ENST00000479921 488 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 SETP7-201ENST00000552169 453 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 AL355812.1-201ENST00000603215 216 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 AC092807.2-201ENST00000609367 243 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 AC244517.12-201ENST00000623581 663 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 Z73965.1-201ENST00000623412 2297 ntBASIC4.11□□□□□ -1.75
SYNE4Q8N205 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE4Q8N205 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE4Q8N205 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE4Q8N205 AL138713.1-201ENST00000624026 2130 ntBASIC4.1□□□□□ -1.75
SYNE4Q8N205 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE4Q8N205 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE4Q8N205 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE4Q8N205 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE4Q8N205 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE4Q8N205 Y_RNA.100-201ENST00000363141 102 ntBASIC4.1□□□□□ -1.75
SYNE4Q8N205 Y_RNA.202-201ENST00000364083 110 ntBASIC4.1□□□□□ -1.75
SYNE4Q8N205 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNE4Q8N205 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE4Q8N205 Y_RNA.395-201ENST00000383945 109 ntBASIC4.1□□□□□ -1.75
SYNE4Q8N205 Y_RNA.414-201ENST00000384011 101 ntBASIC4.1□□□□□ -1.75
SYNE4Q8N205 RPL23AP48-201ENST00000406913 488 ntBASIC4.1□□□□□ -1.75
SYNE4Q8N205 RNU2-36P-201ENST00000410361 191 ntBASIC4.1□□□□□ -1.75
SYNE4Q8N205 RNU2-47P-201ENST00000410649 186 ntBASIC4.1□□□□□ -1.75
SYNE4Q8N205 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNE4Q8N205 BEND7P1-201ENST00000422058 457 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms