Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 MIR6130-201ENST00000619419 109 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC140113.4-201ENST00000622087 222 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC005086.4-201ENST00000623065 213 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.82-201ENST00000363000 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.92-201ENST00000363043 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.235-201ENST00000364412 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.306-201ENST00000365015 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.308-201ENST00000365043 101 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.312-201ENST00000365089 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.322-201ENST00000365151 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 RNU6-326P-201ENST00000365480 107 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 RNU6-926P-201ENST00000384075 107 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.568-201ENST00000384742 113 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 SNORD78.2-201ENST00000391076 69 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Z98745.1-201ENST00000402553 494 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 RNU4-30P-201ENST00000410245 143 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 RNU5E-9P-201ENST00000411164 104 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 AL035461.1-201ENST00000421490 332 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 HIGD1AP2-201ENST00000446367 280 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 AC073587.1-201ENST00000447093 876 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.650-201ENST00000459002 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 RN7SL346P-201ENST00000491561 294 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 SUMO2P6-201ENST00000505273 288 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 RNU5F-8P-201ENST00000515941 111 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 RNA5SP446-201ENST00000515955 82 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.777-201ENST00000516982 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 MIR4308-201ENST00000580634 81 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 MIR4282-201ENST00000583613 67 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.771-201ENST00000598668 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 AC004852.3-201ENST00000614131 326 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.789-201ENST00000622480 102 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 IGHVIII-44-202ENST00000636235 289 ntBASIC4.19□□□□□ -1.74
ATG4DQ86TL0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.19□□□□□ -1.74
ATG4DQ86TL0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC100821.1-201ENST00000523153 2479 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 MAPK10-303ENST00000641324 3959 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 IQCB2P-201ENST00000401788 1633 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.275-201ENST00000364726 110 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.353-201ENST00000365440 108 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC019155.1-201ENST00000382242 574 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 MIR186-201ENST00000384988 86 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 MT-TC-201ENST00000387405 66 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC119751.6-201ENST00000416712 186 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 SSXP9-201ENST00000417503 292 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 MTCO1P39-201ENST00000426148 480 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AL451062.2-201ENST00000427515 271 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.18□□□□□ -1.74
ATG4DQ86TL0 HMGB1P27-201ENST00000431429 603 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 MTCO1P5-201ENST00000433573 344 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 ELOCP18-201ENST00000434209 337 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AL162725.1-201ENST00000435405 301 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 USP9YP7-201ENST00000436723 430 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 USP9YP32-201ENST00000452432 430 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4DQ86TL0 SCARNA10-201ENST00000459255 330 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 RPL37P6-202ENST00000464216 403 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC022493.1-201ENST00000492984 337 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC108043.1-201ENST00000512696 574 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.18□□□□□ -1.74
ATG4DQ86TL0 snoU109.6-201ENST00000516831 118 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.706-201ENST00000516933 99 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC103996.1-201ENST00000555468 102 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC131238.1-201ENST00000617135 328 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 U3.53-201ENST00000628922 216 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 AC139713.2-215ENST00000641428 5037 ntBASIC4.18□□□□□ -1.74
ATG4DQ86TL0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATG4DQ86TL0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
ATG4DQ86TL0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.18□□□□□ -1.74
ATG4DQ86TL0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms