Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 SNORD14B-201ENST00000364533 90 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 RNU4-9P-201ENST00000364951 139 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-926P-201ENST00000384075 107 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 U3.30-201ENST00000391308 210 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 Y_RNA.623-201ENST00000411128 95 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AL627311.1-201ENST00000431514 115 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 snoU13.30-201ENST00000458951 104 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 Y_RNA.638-201ENST00000459374 113 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AC109327.1-201ENST00000471666 403 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 NIP7P2-201ENST00000485801 544 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 SCARNA22-201ENST00000503991 125 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-377P-201ENST00000515965 102 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 ATP5F1P5-201ENST00000526403 760 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AC005476.1-201ENST00000554427 397 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 HMGB1P14-201ENST00000557424 591 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 H3F3AP1-201ENST00000559984 334 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AC007224.1-201ENST00000564410 144 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 AC019206.1-201ENST00000621938 425 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 CR381572.2-201ENST00000624852 397 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SH3RF1Q7Z6J0 ZNF826P-207ENST00000622273 1910 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 Y_RNA.275-201ENST00000364726 110 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 SNORA70E-201ENST00000384492 135 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 MIR10A-201ENST00000385043 110 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 MIR34A-201ENST00000385130 110 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 SNORA68.2-201ENST00000391263 128 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 BTF3L4P2-201ENST00000392798 346 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AC010154.1-201ENST00000425857 269 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AC011276.1-201ENST00000469688 323 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AC108751.2-201ENST00000469993 231 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 HSPE1P6-201ENST00000479457 291 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 RPL21P13-201ENST00000488305 481 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 RN7SL604P-201ENST00000492589 296 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AC022968.1-201ENST00000567372 442 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AL645944.1-201ENST00000603857 493 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AL161798.1-201ENST00000604630 131 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AL121932.1-201ENST00000605542 214 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 FAM27B-201ENST00000610601 213 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 AC008785.1-201ENST00000624475 456 ntBASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.4□□□□□ -1.54
SH3RF1Q7Z6J0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.4□□□□□ -1.55
SH3RF1Q7Z6J0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SH3RF1Q7Z6J0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SH3RF1Q7Z6J0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-428P-201ENST00000362942 107 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.273-201ENST00000364703 102 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.497-201ENST00000384447 98 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-918P-201ENST00000391219 106 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 RNU5A-5P-201ENST00000411054 116 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 AC005002.2-201ENST00000438228 269 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 AC016831.4-201ENST00000438302 307 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 AL591623.2-201ENST00000449978 222 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 AC074133.1-201ENST00000515696 183 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-919P-201ENST00000516731 104 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 MIR92B-201ENST00000607575 96 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 AC005046.1-201ENST00000608515 625 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 TLK1P1-201ENST00000456760 2440 ntBASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms