Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 ACTR3BP3-201ENST00000565577 979 ntBASIC3.06□□□□□ -1.92
NPHP3Q7Z494 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.06□□□□□ -1.92
NPHP3Q7Z494 AC239868.4-201ENST00000608318 671 ntBASIC3.06□□□□□ -1.92
NPHP3Q7Z494 AC073114.1-201ENST00000612027 490 ntBASIC3.06□□□□□ -1.92
NPHP3Q7Z494 ELL2P3-201ENST00000457883 1602 ntBASIC3.06□□□□□ -1.92
NPHP3Q7Z494 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.06□□□□□ -1.92
NPHP3Q7Z494 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPHP3Q7Z494 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NPHP3Q7Z494 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.06□□□□□ -1.92
NPHP3Q7Z494 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPHP3Q7Z494 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 U3.4-201ENST00000363352 213 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 RPL23AP36-201ENST00000413895 458 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AL590365.1-201ENST00000450788 243 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 snoU13.28-201ENST00000459235 104 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 RPS29P12-201ENST00000460178 152 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AC117532.1-201ENST00000514638 323 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 SCARNA15.2-201ENST00000516409 127 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 RNU6-1003P-201ENST00000517099 105 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AP002748.2-201ENST00000528671 348 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AP000907.2-201ENST00000530827 353 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AC124947.2-202ENST00000552735 133 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AP005136.1-201ENST00000579765 429 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 OR10AB1P-201ENST00000609613 938 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 MIR7111-201ENST00000619751 72 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 MIR6766-201ENST00000622641 72 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 MIR4275-201ENST00000636486 87 ntBASIC3.05□□□□□ -1.92
NPHP3Q7Z494 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
NPHP3Q7Z494 SDAD1P2-201ENST00000441308 2028 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 RNU5E-5P-201ENST00000365379 116 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 SNORD116-1-201ENST00000384335 95 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 MIR19A-201ENST00000384878 82 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 Y_RNA.595-201ENST00000410403 105 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 RNU6-1140P-201ENST00000410517 106 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AL356583.2-201ENST00000426536 280 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AL592045.1-201ENST00000429867 352 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AL512844.2-201ENST00000433990 593 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 SETP8-201ENST00000435341 628 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 MTND1P9-201ENST00000453775 944 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 TBCAP3-201ENST00000512475 312 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 RNU6-928P-201ENST00000516876 104 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC123904.2-201ENST00000548059 300 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC011494.1-201ENST00000596454 237 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AP001981.2-201ENST00000603241 418 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AL590229.1-201ENST00000603497 542 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC012360.2-201ENST00000609349 391 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 MIR6845-201ENST00000613182 61 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC009268.2-201ENST00000621925 457 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 AC019226.1-201ENST00000625666 515 ntBASIC3.04□□□□□ -1.92
NPHP3Q7Z494 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NPHP3Q7Z494 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 MTND4P4-201ENST00000439033 1366 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 DEFA7P-201ENST00000382676 285 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 RNU6-198P-201ENST00000384258 104 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 SNORA80E-201ENST00000384744 137 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 SPA17P1-201ENST00000416656 452 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 USP9YP13-201ENST00000417797 480 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 AC244035.1-201ENST00000430042 390 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 AC129850.1-201ENST00000436203 508 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 RPL22P17-201ENST00000438729 315 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 AL049734.2-201ENST00000441066 616 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 Z83846.1-201ENST00000446798 265 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 SNRPGP9-201ENST00000456025 225 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 RNU6-420P-201ENST00000458780 107 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 AC116337.2-201ENST00000477662 156 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 RPL38P4-201ENST00000502376 214 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 RAC1P5-201ENST00000512182 576 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.03□□□□□ -1.92
NPHP3Q7Z494 AC108729.3-201ENST00000513484 108 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 RNA5SP200-201ENST00000516360 103 ntBASIC3.03□□□□□ -1.92
NPHP3Q7Z494 SCARNA16.3-201ENST00000516595 184 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms