Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL590410.1-201ENST00000617925 333 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 uc_338.22-201ENST00000622722 187 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 RNU6-989P-201ENST00000362756 107 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 RNU2-63P-201ENST00000410792 194 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 CST2P1-201ENST00000425770 87 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 FAM60BP-201ENST00000578364 658 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 MIR4765-201ENST00000585007 77 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AL355877.2-201ENST00000603670 358 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 RNA5SP258-201ENST00000362750 119 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 RNU6-1155P-201ENST00000363554 107 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 SNORA68.1-201ENST00000364537 132 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AL356421.1-201ENST00000403255 413 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AL365496.1-201ENST00000426885 215 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 RPL7P29-201ENST00000437151 728 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 snoU13.28-201ENST00000459235 104 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.58□□□□□ -2.32
CSMD3Q7Z407 BX322635.1-201ENST00000605804 496 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 AC087588.2-201ENST00000617667 426 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 LINC02211-204ENST00000642024 1070 ntBASIC0.58□□□□□ -2.32
CSMD3Q7Z407 HAUS6P2-201ENST00000433254 2404 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 RNU6-1249P-201ENST00000363237 111 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 ZNF965P-201ENST00000432501 817 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 MTCYBP23-201ENST00000558717 1102 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AC008749.1-201ENST00000597650 306 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AL096840.1-201ENST00000603287 93 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AL050343.2-201ENST00000607338 280 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AC073544.1-201ENST00000600110 1595 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 SNORA3A-201ENST00000364113 130 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AC004383.1-201ENST00000438135 289 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AC104689.1-201ENST00000473356 768 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 HMGB1P14-201ENST00000557424 591 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 MIR3921-201ENST00000577308 85 ntBASIC0.57□□□□□ -2.32
CSMD3Q7Z407 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.57□□□□□ -2.32
CSMD3Q7Z407 Y_RNA.493-201ENST00000384422 102 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 RNU6-351P-201ENST00000516097 100 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AL133241.1-201ENST00000556832 487 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AC092474.3-201ENST00000603022 568 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 NACAP2-201ENST00000318548 624 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 RNA5SP240-201ENST00000365355 128 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 RNU6-19P-201ENST00000384718 107 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 CISD1P1-201ENST00000393907 327 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 TRGVB-201ENST00000453257 471 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AL359385.1-201ENST00000456509 365 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 RNU1-98P-201ENST00000458992 160 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 RPS27P26-201ENST00000494583 239 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AC112198.4-201ENST00000515450 351 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AP006248.3-201ENST00000623580 594 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AP003400.5-201ENST00000624827 617 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 MTCO3P4-201ENST00000419236 787 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 USP12PX-201ENST00000432383 1057 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AC118469.1-201ENST00000442943 488 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 EIF4EP3-201ENST00000498782 656 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 RN7SKP179-201ENST00000516126 217 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 RNU6-1308P-201ENST00000516817 103 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.56□□□□□ -2.32
CSMD3Q7Z407 AL109918.3-201ENST00000603072 338 ntBASIC0.56□□□□□ -2.32
CSMD3Q7Z407 MIR1302-8-201ENST00000408342 128 ntBASIC0.55□□□□□ -2.32
CSMD3Q7Z407 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.55□□□□□ -2.32
CSMD3Q7Z407 RNU7-26P-201ENST00000458980 63 ntBASIC0.55□□□□□ -2.32
CSMD3Q7Z407 AC113398.2-201ENST00000507630 558 ntBASIC0.55□□□□□ -2.32
CSMD3Q7Z407 MRPS36P2-201ENST00000512569 299 ntBASIC0.55□□□□□ -2.32
CSMD3Q7Z407 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.55□□□□□ -2.32
CSMD3Q7Z407 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms