Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC093106.2-201ENST00000428212 385 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AL121871.1-201ENST00000443413 436 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC078918.1-201ENST00000498515 228 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC103851.1-201ENST00000506833 274 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 MTCO3P9-201ENST00000506989 781 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC117522.3-201ENST00000507974 584 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC108078.2-201ENST00000510750 236 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 RNU4-49P-201ENST00000516080 140 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 RNU6-277P-201ENST00000516272 106 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 Y_RNA.691-201ENST00000516611 103 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 RNU6-685P-201ENST00000517088 95 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 RN7SKP256-201ENST00000517201 314 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC004024.1-201ENST00000549244 247 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC093012.1-202ENST00000549403 582 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AL121603.1-201ENST00000553815 142 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC011471.1-201ENST00000585766 187 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC093913.1-201ENST00000614178 329 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 uc_338.34-201ENST00000617467 174 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 AC058791.1-201ENST00000608412 3198 ntBASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE3BQ7Z3V4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC010733.2-201ENST00000589496 5702 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 MIR184-201ENST00000384962 84 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 RNU6-882P-201ENST00000391025 103 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 UBE2V1P2-201ENST00000397758 440 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 RNU4-46P-201ENST00000410818 138 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC244098.2-201ENST00000422068 99 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 RPL7P46-201ENST00000425129 740 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AL590639.1-201ENST00000456484 337 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC005921.1-201ENST00000510589 286 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 TTC39CP1-201ENST00000512513 755 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 RPL7P20-201ENST00000520308 745 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AL137161.1-201ENST00000532231 390 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AP004242.1-201ENST00000533701 349 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC093027.1-201ENST00000546698 429 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 SCOCP1-201ENST00000554676 349 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 MIR4425-201ENST00000580572 84 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 MIR4325-201ENST00000583049 90 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AF038458.1-201ENST00000588406 262 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC243960.4-201ENST00000600532 288 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AL390240.1-201ENST00000612950 384 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 AC018692.3-201ENST00000623929 123 ntBASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.03□□□□□ -1.76
UBE3BQ7Z3V4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 MTND4P14-201ENST00000435799 1354 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 Y_RNA.167-201ENST00000363735 109 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 RNU6-946P-201ENST00000383878 107 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 RNU6-116P-201ENST00000384042 109 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 Y_RNA.460-201ENST00000384255 102 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 RNU6-831P-201ENST00000384548 107 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AL592114.1-201ENST00000403842 483 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 CALM2P2-201ENST00000428512 440 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 RPL23AP69-201ENST00000431134 458 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 RPL21P112-201ENST00000434403 463 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 MRPS31P2-201ENST00000451581 518 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AC021205.2-201ENST00000480069 347 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AC104806.1-201ENST00000508720 308 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 RNU2-58P-201ENST00000516403 183 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 IGKV2-23-201ENST00000518729 323 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 MTND4P7-201ENST00000523876 130 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AC109635.4-202ENST00000531666 412 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AL118558.2-201ENST00000556294 238 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 TGIF1P1-201ENST00000558095 802 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 ANP32BP3-201ENST00000559213 706 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AC008521.1-201ENST00000587471 187 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 XIAPP1-201ENST00000603162 600 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AL022099.1-201ENST00000604551 712 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 AL050343.2-201ENST00000607338 280 ntBASIC4.02□□□□□ -1.77
UBE3BQ7Z3V4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms