Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC080078.3-201ENST00000605407 463 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AC007619.2-201ENST00000605743 379 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AL670379.7-201ENST00000605823 252 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 AC012409.4-201ENST00000612923 249 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AC040896.1-201ENST00000613819 479 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AC103705.1-201ENST00000619013 241 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 DDX10P1-201ENST00000448545 1933 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.14□□□□□ -1.75
KRT40Q6A162 AC090229.1-201ENST00000590983 1609 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.13□□□□□ -1.75
KRT40Q6A162 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRT40Q6A162 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.13□□□□□ -1.75
KRT40Q6A162 RNU6-1249P-201ENST00000363237 111 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 SNORA23-201ENST00000365128 182 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 RNU6-1013P-201ENST00000384180 107 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 RNU6-14P-201ENST00000384630 106 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 MIR153-1-201ENST00000384914 90 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 MIR559-201ENST00000385188 96 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 SNORA16.2-201ENST00000390991 127 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 NDUFS5P1-201ENST00000405668 289 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 U3.39-201ENST00000408569 239 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 RNU6-387P-201ENST00000411331 105 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 BX682237.1-201ENST00000415016 335 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 AC099677.1-201ENST00000420575 175 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 SKA2P1-201ENST00000425592 390 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 CKS1BP5-201ENST00000434172 273 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT40Q6A162 RPL21P23-201ENST00000446654 460 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 ANP32BP2-201ENST00000454525 545 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 AC008155.2-201ENST00000464337 397 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 RNU6-1170P-201ENST00000515974 106 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 SNORA70.18-201ENST00000516696 98 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 Y_RNA.711-201ENST00000516993 102 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 RNA5SP454-201ENST00000517231 127 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 AP006587.4-201ENST00000526053 529 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 AC126177.3-201ENST00000551839 688 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 AC067852.3-201ENST00000589177 561 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.13□□□□□ -1.75
KRT40Q6A162 uc_338.32-201ENST00000615087 172 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 FAM157A-202ENST00000615155 405 ntBASIC4.13□□□□□ -1.75
KRT40Q6A162 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KRT40Q6A162 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.13□□□□□ -1.75
KRT40Q6A162 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.13□□□□□ -1.75
KRT40Q6A162 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRT40Q6A162 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRT40Q6A162 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRT40Q6A162 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRT40Q6A162 XIAPP3-201ENST00000312918 795 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 SNORD9-201ENST00000362566 104 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 RNA5SP235-201ENST00000365411 114 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRT40Q6A162 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
KRT40Q6A162 AC110754.1-201ENST00000399740 601 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 RNU6-370P-201ENST00000411008 104 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 AC092809.3-201ENST00000415453 231 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 AC245054.2-201ENST00000415639 319 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 AC017079.2-201ENST00000416102 485 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 DBIP2-201ENST00000419076 262 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 AL137014.1-201ENST00000420490 1226 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 PPP1R11P2-201ENST00000423543 382 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRT40Q6A162 MRPS31P2-201ENST00000451581 518 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 Y_RNA.631-201ENST00000459607 101 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 DYNLL1P5-201ENST00000467158 270 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 UBE2DNL-203ENST00000474922 222 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 RPL23AP55-201ENST00000498163 452 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRT40Q6A162 AC090115.3-201ENST00000553218 849 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRT40Q6A162 MIR4790-201ENST00000577799 79 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 AF038458.1-201ENST00000588406 262 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 IGHV3-29-201ENST00000604817 344 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.12□□□□□ -1.75
KRT40Q6A162 AC022893.3-201ENST00000607665 437 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 AL353748.2-201ENST00000622148 471 ntBASIC4.12□□□□□ -1.75
KRT40Q6A162 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
KRT40Q6A162 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.12□□□□□ -1.75
KRT40Q6A162 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
KRT40Q6A162 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
KRT40Q6A162 AL137003.2-201ENST00000606924 2538 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 Y_RNA.395-201ENST00000383945 109 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 Y_RNA.500-201ENST00000384466 111 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 RNA5SP219-201ENST00000390940 113 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 EIF4E2P1-201ENST00000393781 255 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 AL583834.1-201ENST00000406943 343 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 ATP5A1P2-201ENST00000412323 255 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.11□□□□□ -1.75
KRT40Q6A162 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.11□□□□□ -1.75
KRT40Q6A162 AC073063.1-201ENST00000434352 607 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 AC004866.2-201ENST00000438285 481 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 RPS3AP46-201ENST00000448352 682 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 AC107399.1-201ENST00000451226 265 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.11□□□□□ -1.75
KRT40Q6A162 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.11□□□□□ -1.75
KRT40Q6A162 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms