Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC112492.4-201ENST00000456549 352 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 FCF1P6-201ENST00000456841 595 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 snoU13.15-201ENST00000459407 104 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 RPL22P13-201ENST00000493291 347 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 COX7A2P2-201ENST00000505291 250 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC117522.2-201ENST00000510049 657 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 RNU1-92P-201ENST00000517017 135 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AP003034.1-201ENST00000534621 422 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC027807.1-201ENST00000559921 996 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC023043.2-201ENST00000589678 1026 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC005261.5-201ENST00000596280 355 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 GAS5-AS1-201ENST00000602767 694 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC073413.2-201ENST00000604332 360 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC004067.1-201ENST00000608733 700 ntBASIC1.04□□□□□ -2.24
CCDC58Q4VC31 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.03□□□□□ -2.24
CCDC58Q4VC31 RNU6-661P-201ENST00000362409 107 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CCDC58Q4VC31 MIR29C-201ENST00000385231 88 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CCDC58Q4VC31 AL021407.1-201ENST00000404531 386 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 TXNP7-201ENST00000406296 293 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 C1DP1-201ENST00000426049 402 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 HMGB1P27-201ENST00000431429 603 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC58Q4VC31 RPL32P28-201ENST00000443577 397 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 RPL39P29-201ENST00000447779 157 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 RPL23AP23-201ENST00000452590 471 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 SNORD97-201ENST00000459187 142 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 AP001324.2-201ENST00000461163 319 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC58Q4VC31 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.03□□□□□ -2.24
CCDC58Q4VC31 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC58Q4VC31 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC58Q4VC31 CYB5AP5-201ENST00000549779 389 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 NACAP3-201ENST00000552100 481 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 AC005668.1-201ENST00000571142 476 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 MTND5P9-201ENST00000503854 1755 ntBASIC1.03□□□□□ -2.24
CCDC58Q4VC31 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC58Q4VC31 RNU6-878P-201ENST00000384578 110 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 RPL23AP36-201ENST00000413895 458 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC58Q4VC31 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC58Q4VC31 AC245517.4-201ENST00000448601 281 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 RBBP8P1-201ENST00000449447 1844 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC58Q4VC31 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC58Q4VC31 RNU6-902P-201ENST00000517212 91 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 AP000916.1-201ENST00000533869 835 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 AC006199.1-201ENST00000548728 219 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC58Q4VC31 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC58Q4VC31 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC58Q4VC31 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 AL359314.1-201ENST00000616913 261 ntBASIC1.02□□□□□ -2.25
CCDC58Q4VC31 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC58Q4VC31 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC58Q4VC31 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 CCDC58P2-201ENST00000417131 366 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC58Q4VC31 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC58Q4VC31 DYNLT3P2-201ENST00000442517 295 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 AC018437.1-201ENST00000492214 406 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 RNU6-889P-201ENST00000517189 103 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 ARL2BPP5-201ENST00000523141 481 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
CCDC58Q4VC31 AP000873.5-201ENST00000533906 236 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.01□□□□□ -2.25
CCDC58Q4VC31 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC58Q4VC31 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.01□□□□□ -2.25
CCDC58Q4VC31 AC091152.3-201ENST00000604227 325 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 AC025811.1-201ENST00000604312 472 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 AC010900.2-201ENST00000604508 210 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 Z75746.1-201ENST00000440243 2080 ntBASIC1.01□□□□□ -2.25
CCDC58Q4VC31 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CCDC58Q4VC31 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CCDC58Q4VC31 SNORD14B-201ENST00000364533 90 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 RNU4-91P-201ENST00000364778 135 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 RNU6-1222P-201ENST00000384615 107 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1□□□□□ -2.25
CCDC58Q4VC31 AC092648.1-201ENST00000425870 423 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 MTCO2P20-201ENST00000437339 673 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 KATNBL1P6-201ENST00000453433 915 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 snoU13.9-201ENST00000458927 103 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 RNU6-775P-201ENST00000459318 96 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 RPS15AP17-201ENST00000470598 390 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1□□□□□ -2.25
CCDC58Q4VC31 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1□□□□□ -2.25
CCDC58Q4VC31 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms