Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AP000763.2-201ENST00000540641 163 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 NACAP3-201ENST00000552100 481 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC073539.2-201ENST00000597113 165 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC007938.3-201ENST00000604965 623 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AC007179.3-201ENST00000604976 235 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 RMST_4.1-201ENST00000616886 107 ntBASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC144BQ3MJ40 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CCDC144BQ3MJ40 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC144BQ3MJ40 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CCDC144BQ3MJ40 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
CCDC144BQ3MJ40 RNU6-1013P-201ENST00000384180 107 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-1077P-201ENST00000410506 102 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 Y_RNA.623-201ENST00000411128 95 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 HSPE1P1-201ENST00000421494 318 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 RPL21P109-201ENST00000422213 475 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AL139247.1-201ENST00000422768 325 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AL591419.1-201ENST00000427423 339 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 TOMM20P4-201ENST00000427861 435 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 HMGN2P31-201ENST00000432430 273 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 SETP5-201ENST00000437270 562 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AL078601.1-201ENST00000444542 271 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 RPL21P11-201ENST00000461458 483 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 MTND3P25-201ENST00000509243 135 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 MIR892C-201ENST00000516410 77 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-572P-201ENST00000516724 80 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-703P-201ENST00000516946 107 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 SNORA31.19-201ENST00000517079 126 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AC087369.1-201ENST00000520775 996 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AC087241.2-201ENST00000535801 324 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AC025253.1-201ENST00000613623 543 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AC063943.3-201ENST00000615562 356 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AL136221.1-201ENST00000621449 509 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 AL031601.2-202ENST00000622650 282 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 U6.99-201ENST00000637524 83 ntBASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC144BQ3MJ40 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 MIR423-201ENST00000362201 94 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-884P-201ENST00000363889 107 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 RNU1-73P-201ENST00000383971 164 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 SNORA32.2-201ENST00000384049 122 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 RNA5SP38-201ENST00000410750 119 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AC099548.1-201ENST00000421443 426 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AL645937.1-202ENST00000421799 937 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 MTCO3P46-201ENST00000425787 232 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AC007560.1-201ENST00000426912 237 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 RANP8-201ENST00000444720 713 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AL133162.1-201ENST00000463228 453 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AC128713.1-201ENST00000471495 306 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 RN7SL271P-201ENST00000487601 295 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 SNORA31.1-201ENST00000515993 133 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 SNORA19.2-201ENST00000516013 114 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 SNORA31.5-201ENST00000516190 133 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 RNU1-103P-201ENST00000516502 125 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 BTF3P12-201ENST00000519620 469 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 MIR4782-201ENST00000577987 79 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 BNIP3P25-201ENST00000596023 559 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AC103710.3-201ENST00000608157 948 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AL355073.2-201ENST00000612106 557 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 AC009248.2-201ENST00000619826 254 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 U2.21-201ENST00000637295 81 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 SRP72P2-201ENST00000344851 1979 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 MTND4P12-201ENST00000498999 1377 ntBASIC4.39□□□□□ -1.71
CCDC144BQ3MJ40 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144BQ3MJ40 RNU6-845P-201ENST00000362578 103 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms