Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC009229.3-201ENST00000608056 282 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC091304.6-201ENST00000619761 202 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 AC109454.4-201ENST00000623411 649 ntBASIC0.8□□□□□ -2.28
CACNA1EQ15878 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1EQ15878 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CACNA1EQ15878 VN1R36P-201ENST00000414936 291 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.79□□□□□ -2.28
CACNA1EQ15878 MTCO3P4-201ENST00000419236 787 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 AC244636.1-201ENST00000421152 228 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 AC079780.1-201ENST00000428259 207 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.79□□□□□ -2.28
CACNA1EQ15878 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.79□□□□□ -2.28
CACNA1EQ15878 AC117503.1-201ENST00000472241 394 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 AC104108.1-201ENST00000509930 412 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 RNU7-193P-201ENST00000516723 65 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.79□□□□□ -2.28
CACNA1EQ15878 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.79□□□□□ -2.28
CACNA1EQ15878 AC025588.4-201ENST00000615802 908 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 AC107905.1-201ENST00000616204 426 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.79□□□□□ -2.28
CACNA1EQ15878 MIR6759-201ENST00000638110 65 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 AC121333.1-201ENST00000567488 2709 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 AL049737.1-201ENST00000413920 1403 ntBASIC0.79□□□□□ -2.28
CACNA1EQ15878 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CACNA1EQ15878 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 MIR421-201ENST00000365696 85 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 U3.20-201ENST00000390909 217 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 RPL7L1P10-201ENST00000427790 463 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC027575.1-201ENST00000481064 460 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CACNA1EQ15878 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 SNORA48.11-201ENST00000517015 89 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC005786.1-201ENST00000588553 154 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC073111.2-201ENST00000605657 1075 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC005021.1-201ENST00000608730 355 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 AL773524.1-201ENST00000614065 229 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CACNA1EQ15878 RNU6-819P-201ENST00000364116 107 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 Y_RNA.493-201ENST00000384422 102 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 MIR1303-201ENST00000408625 86 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 Z80107.1-201ENST00000436830 412 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC005410.1-202ENST00000460347 485 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 SNORA31.18-201ENST00000517043 134 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC004217.3-201ENST00000551552 878 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC115989.2-201ENST00000578640 563 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 MIR2909-201ENST00000617113 69 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 AC091925.1-201ENST00000623204 462 ntBASIC0.78□□□□□ -2.28
CACNA1EQ15878 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
CACNA1EQ15878 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 RNU6-105P-201ENST00000363909 104 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AL139397.2-201ENST00000404529 772 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC068135.1-201ENST00000446164 246 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 Z82190.1-201ENST00000454534 490 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC008676.3-201ENST00000521237 435 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 POLR2KP1-201ENST00000553226 168 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC027104.1-201ENST00000563702 681 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC005034.5-201ENST00000604219 466 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC021749.1-201ENST00000604322 607 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 AL022578.1-201ENST00000439330 1433 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 RNU6-288P-201ENST00000363690 104 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 RNU6-220P-201ENST00000390919 107 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CACNA1EQ15878 FCF1P2-201ENST00000415284 583 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC099548.1-201ENST00000421443 426 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AL365496.1-201ENST00000426885 215 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC244035.1-201ENST00000430042 390 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 RPL7P29-201ENST00000437151 728 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC117525.1-201ENST00000515228 503 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 APOOP3-201ENST00000536787 586 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.77□□□□□ -2.29
CACNA1EQ15878 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC021851.1-201ENST00000608537 1082 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms