Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.28□□□□□ -1.72
NR1I3Q14994 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1I3Q14994 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1I3Q14994 AC008264.1-201ENST00000447612 367 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 OR2AQ1P-201ENST00000451972 200 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 AC133473.1-201ENST00000455173 299 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 PCMTD1P1-201ENST00000455560 355 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 RNU6-953P-201ENST00000459154 107 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 TRBV12-2-201ENST00000489763 344 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 AC231760.1-201ENST00000498002 260 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 RNU2-53P-201ENST00000516257 147 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 RN7SKP234-201ENST00000517173 224 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.28□□□□□ -1.72
NR1I3Q14994 AP000889.1-201ENST00000530968 660 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 AC023157.2-201ENST00000540596 141 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.28□□□□□ -1.72
NR1I3Q14994 AC015967.1-201ENST00000619893 476 ntBASIC4.28□□□□□ -1.72
NR1I3Q14994 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NR1I3Q14994 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.27□□□□□ -1.73
NR1I3Q14994 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
NR1I3Q14994 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
NR1I3Q14994 AC233263.6-201ENST00000631132 1963 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1I3Q14994 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1I3Q14994 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.27□□□□□ -1.73
NR1I3Q14994 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1I3Q14994 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1I3Q14994 MIR383-201ENST00000362257 73 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 Y_RNA.26-201ENST00000362539 101 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 RNU4-70P-201ENST00000384579 139 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 MIR578-201ENST00000384828 96 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 MIR192-201ENST00000384915 110 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 MIR1250-201ENST00000408098 113 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.27□□□□□ -1.73
NR1I3Q14994 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.27□□□□□ -1.73
NR1I3Q14994 RPS27AP12-201ENST00000429552 465 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 AC073063.1-201ENST00000434352 607 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 TBCAP1-201ENST00000436520 327 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 AL772161.1-201ENST00000439130 476 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 RANP8-201ENST00000444720 713 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 RPL23AP31-201ENST00000456160 467 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NR1I3Q14994 AC011005.2-201ENST00000487324 359 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 RPL17P19-201ENST00000489069 552 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 RPS23P1-201ENST00000491662 432 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 RNU6-840P-201ENST00000517275 65 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 AC040926.1-201ENST00000530195 238 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.27□□□□□ -1.73
NR1I3Q14994 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.27□□□□□ -1.73
NR1I3Q14994 AC005951.2-201ENST00000576282 495 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 MIR5188-201ENST00000583467 113 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 AC093227.2-201ENST00000589357 285 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 AC016727.2-201ENST00000603988 621 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 Z98751.3-201ENST00000604447 521 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 AL031601.2-202ENST00000622650 282 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 BMS1P21-201ENST00000634565 365 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
NR1I3Q14994 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1I3Q14994 ZNF285B-201ENST00000561698 1767 ntBASIC4.27□□□□□ -1.73
NR1I3Q14994 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1I3Q14994 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NR1I3Q14994 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1I3Q14994 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1I3Q14994 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
NR1I3Q14994 MAPK10-372ENST00000641954 3413 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
NR1I3Q14994 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1I3Q14994 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1I3Q14994 Y_RNA.480-201ENST00000384364 102 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 Y_RNA.483-201ENST00000384380 101 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 RNU6-790P-201ENST00000384479 105 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 Y_RNA.552-201ENST00000384665 112 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NR1I3Q14994 AL445529.1-201ENST00000398713 389 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 MIR548I3-201ENST00000408378 149 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 MIR548I1-201ENST00000408810 149 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1I3Q14994 RNU2-43P-201ENST00000410306 190 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 RNU6-1156P-201ENST00000410365 100 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1I3Q14994 AL133396.1-201ENST00000432048 687 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1I3Q14994 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1I3Q14994 RNU6-1132P-201ENST00000459214 107 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 RPL37P6-201ENST00000460682 294 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NR1I3Q14994 RN7SKP258-201ENST00000517151 304 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 IGHV3-76-201ENST00000522465 295 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 AC022790.1-201ENST00000522872 204 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1I3Q14994 CBX3P8-201ENST00000532412 525 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.26□□□□□ -1.73
NR1I3Q14994 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1I3Q14994 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NR1I3Q14994 HMGN2P28-201ENST00000606102 262 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 AP000346.3-201ENST00000622821 210 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 AC010615.1-201ENST00000594254 1764 ntBASIC4.26□□□□□ -1.73
NR1I3Q14994 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
NR1I3Q14994 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1I3Q14994 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms