Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR492-201ENST00000638676 116 ntBASIC4.61□□□□□ -1.67
SOX4Q06945 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX4Q06945 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SOX4Q06945 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX4Q06945 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX4Q06945 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX4Q06945 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX4Q06945 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX4Q06945 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SOX4Q06945 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.61□□□□□ -1.67
SOX4Q06945 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX4Q06945 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX4Q06945 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX4Q06945 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SOX4Q06945 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX4Q06945 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SOX4Q06945 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX4Q06945 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.6□□□□□ -1.67
SOX4Q06945 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 AP001148.1-201ENST00000624124 2359 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX4Q06945 RNA5SP52-201ENST00000362448 134 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU1-94P-201ENST00000362627 173 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-37P-201ENST00000362692 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-1266P-201ENST00000362794 105 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 SNORD81.1-201ENST00000363064 77 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-11P-201ENST00000364234 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-7-201ENST00000364784 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-8-201ENST00000365467 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-25P-201ENST00000383873 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-1-201ENST00000383898 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-48P-201ENST00000384161 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-36P-201ENST00000384172 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-4P-201ENST00000384205 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-5P-201ENST00000384238 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-3P-201ENST00000384314 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-16P-201ENST00000384385 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-15P-201ENST00000384534 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-2-201ENST00000384627 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-29P-201ENST00000384637 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-9-201ENST00000384776 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 SNORD66.1-201ENST00000391230 76 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RPS26P8-201ENST00000393490 348 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 MRPL35P1-201ENST00000404272 572 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 MIR1271-201ENST00000408537 86 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 MIR1298-201ENST00000408783 112 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 Y_RNA.793-201ENST00000411222 111 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.6□□□□□ -1.67
SOX4Q06945 AL606753.1-201ENST00000427435 87 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 MTND3P9-201ENST00000429526 346 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 COX6B1P7-201ENST00000430845 235 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 U8.21-201ENST00000459536 136 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-927P-201ENST00000516199 100 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNA5SP73-201ENST00000516744 108 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-143P-201ENST00000516942 93 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-255P-201ENST00000516957 105 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-1315P-201ENST00000517187 99 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 AC022868.1-201ENST00000517767 391 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 AC091144.1-201ENST00000519573 138 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 AC007458.1-201ENST00000542812 373 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX4Q06945 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX4Q06945 RNU6-6P-201ENST00000606623 107 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 MIR8076-201ENST00000611401 83 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 AC023043.4-201ENST00000612081 449 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SOX4Q06945 AC243829.7-201ENST00000633081 225 ntBASIC4.6□□□□□ -1.67
SOX4Q06945 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX4Q06945 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SOX4Q06945 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX4Q06945 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SOX4Q06945 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX4Q06945 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SOX4Q06945 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SOX4Q06945 RNU1-20P-201ENST00000363314 162 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 RN7SKP227-201ENST00000364445 330 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 U3.13-201ENST00000364804 214 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SOX4Q06945 Y_RNA.439-201ENST00000384119 94 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 SNORA36C-201ENST00000384289 132 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 MIR301A-201ENST00000385261 86 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX4Q06945 AL022722.2-201ENST00000402519 180 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX4Q06945 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SOX4Q06945 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.59□□□□□ -1.67
SOX4Q06945 AC087650.1-201ENST00000431445 468 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SOX4Q06945 AL590399.6-201ENST00000446396 307 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SOX4Q06945 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX4Q06945 Y_RNA.644-201ENST00000459006 113 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 RPS23P5-201ENST00000495419 428 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SOX4Q06945 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX4Q06945 AL592156.1-201ENST00000508758 304 ntBASIC4.59□□□□□ -1.67
SOX4Q06945 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.59□□□□□ -1.67
SOX4Q06945 RN7SKP46-201ENST00000515942 234 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms