Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.22□□□□□ -1.89
LTBQ06643 AL121821.2-201ENST00000556081 394 ntBASIC3.22□□□□□ -1.89
LTBQ06643 NCAPGP2-201ENST00000557911 754 ntBASIC3.22□□□□□ -1.89
LTBQ06643 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LTBQ06643 MTCO3P13-201ENST00000577757 781 ntBASIC3.22□□□□□ -1.89
LTBQ06643 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.22□□□□□ -1.89
LTBQ06643 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.22□□□□□ -1.89
LTBQ06643 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.22□□□□□ -1.89
LTBQ06643 BNIP3P25-201ENST00000596023 559 ntBASIC3.22□□□□□ -1.89
LTBQ06643 AC092807.2-201ENST00000609367 243 ntBASIC3.22□□□□□ -1.89
LTBQ06643 AC107294.1-201ENST00000609524 467 ntBASIC3.22□□□□□ -1.89
LTBQ06643 TUG1_2.1-201ENST00000614234 87 ntBASIC3.22□□□□□ -1.89
LTBQ06643 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.22□□□□□ -1.89
LTBQ06643 MIR8057-201ENST00000620957 69 ntBASIC3.22□□□□□ -1.89
LTBQ06643 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LTBQ06643 AL021368.2-201ENST00000606125 5352 ntBASIC3.22□□□□□ -1.89
LTBQ06643 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.22□□□□□ -1.89
LTBQ06643 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
LTBQ06643 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LTBQ06643 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
LTBQ06643 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LTBQ06643 RNA5SP432-201ENST00000362480 116 ntBASIC3.21□□□□□ -1.9
LTBQ06643 SNORD9-201ENST00000362566 104 ntBASIC3.21□□□□□ -1.9
LTBQ06643 SNORA7.2-201ENST00000364446 145 ntBASIC3.21□□□□□ -1.9
LTBQ06643 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.21□□□□□ -1.9
LTBQ06643 SMIM11P1-201ENST00000369586 178 ntBASIC3.21□□□□□ -1.9
LTBQ06643 RNU6-837P-201ENST00000391056 108 ntBASIC3.21□□□□□ -1.9
LTBQ06643 RNU4-14P-201ENST00000410858 122 ntBASIC3.21□□□□□ -1.9
LTBQ06643 RNA5SP120-201ENST00000410900 112 ntBASIC3.21□□□□□ -1.9
LTBQ06643 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
LTBQ06643 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.21□□□□□ -1.9
LTBQ06643 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.21□□□□□ -1.9
LTBQ06643 RPL7P46-201ENST00000425129 740 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.21□□□□□ -1.9
LTBQ06643 AL158071.1-201ENST00000430315 461 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC073063.1-201ENST00000434352 607 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC234775.1-201ENST00000454247 670 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.21□□□□□ -1.9
LTBQ06643 SNORD97-201ENST00000459187 142 ntBASIC3.21□□□□□ -1.9
LTBQ06643 RPL21P10-201ENST00000463521 490 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC010631.1-201ENST00000474150 156 ntBASIC3.21□□□□□ -1.9
LTBQ06643 RPL31P13-201ENST00000484151 370 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC096576.1-201ENST00000489014 359 ntBASIC3.21□□□□□ -1.9
LTBQ06643 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.21□□□□□ -1.9
LTBQ06643 RBBP4P6-201ENST00000508098 202 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC108078.2-201ENST00000510750 236 ntBASIC3.21□□□□□ -1.9
LTBQ06643 RNU6-864P-201ENST00000516256 108 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC100870.1-201ENST00000522035 505 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.21□□□□□ -1.9
LTBQ06643 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LTBQ06643 AP004242.1-201ENST00000533701 349 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC020661.2-201ENST00000560114 134 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.21□□□□□ -1.9
LTBQ06643 MIR4644-201ENST00000579929 84 ntBASIC3.21□□□□□ -1.9
LTBQ06643 MIR3942-201ENST00000585264 109 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC008521.1-201ENST00000587471 187 ntBASIC3.21□□□□□ -1.9
LTBQ06643 POLR3GP2-201ENST00000588366 668 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AC006254.3-201ENST00000603353 884 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AL022099.1-201ENST00000604551 712 ntBASIC3.21□□□□□ -1.9
LTBQ06643 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LTBQ06643 uc_338.15-201ENST00000615470 191 ntBASIC3.21□□□□□ -1.9
LTBQ06643 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.21□□□□□ -1.9
LTBQ06643 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LTBQ06643 EXOC5P1-201ENST00000510543 1969 ntBASIC3.21□□□□□ -1.9
LTBQ06643 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.21□□□□□ -1.9
LTBQ06643 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LTBQ06643 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LTBQ06643 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.21□□□□□ -1.9
LTBQ06643 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LTBQ06643 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.2□□□□□ -1.9
LTBQ06643 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LTBQ06643 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LTBQ06643 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LTBQ06643 RNU6-1287P-201ENST00000362914 107 ntBASIC3.2□□□□□ -1.9
LTBQ06643 RNU6-1284P-201ENST00000363701 100 ntBASIC3.2□□□□□ -1.9
LTBQ06643 RNU6-335P-201ENST00000364563 113 ntBASIC3.2□□□□□ -1.9
LTBQ06643 Y_RNA.259-201ENST00000364619 101 ntBASIC3.2□□□□□ -1.9
LTBQ06643 RNA5SP189-201ENST00000364920 115 ntBASIC3.2□□□□□ -1.9
LTBQ06643 Y_RNA.339-201ENST00000365325 102 ntBASIC3.2□□□□□ -1.9
LTBQ06643 Y_RNA.414-201ENST00000384011 101 ntBASIC3.2□□□□□ -1.9
LTBQ06643 RNU6-301P-201ENST00000384277 107 ntBASIC3.2□□□□□ -1.9
LTBQ06643 RNU6-1060P-201ENST00000384664 107 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AL359634.1-202ENST00000404721 284 ntBASIC3.2□□□□□ -1.9
LTBQ06643 RNU4-65P-201ENST00000410473 140 ntBASIC3.2□□□□□ -1.9
LTBQ06643 RN7SKP53-201ENST00000411337 315 ntBASIC3.2□□□□□ -1.9
LTBQ06643 SSXP9-201ENST00000417503 292 ntBASIC3.2□□□□□ -1.9
LTBQ06643 USP9YP20-201ENST00000419224 558 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.2□□□□□ -1.9
LTBQ06643 BEND7P1-201ENST00000422058 457 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.2□□□□□ -1.9
LTBQ06643 AL353729.1-201ENST00000425044 720 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.2□□□□□ -1.9
LTBQ06643 RPS3AP52-201ENST00000435639 297 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.2□□□□□ -1.9
LTBQ06643 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.2□□□□□ -1.9
LTBQ06643 RPS3AP46-201ENST00000448352 682 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AL162389.1-201ENST00000449233 177 ntBASIC3.2□□□□□ -1.9
LTBQ06643 MRPS31P2-201ENST00000451581 518 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms