Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CYCSP27-201ENST00000527643 293 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.37□□□□□ -1.87
RAE1P78406 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RAE1P78406 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.37□□□□□ -1.87
RAE1P78406 ZNF192P1-203ENST00000565888 810 ntBASIC3.37□□□□□ -1.87
RAE1P78406 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.37□□□□□ -1.87
RAE1P78406 AC073539.2-201ENST00000597113 165 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AC012119.1-201ENST00000603184 222 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AC025946.2-201ENST00000603398 234 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AC103710.3-201ENST00000608157 948 ntBASIC3.37□□□□□ -1.87
RAE1P78406 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.37□□□□□ -1.87
RAE1P78406 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.37□□□□□ -1.87
RAE1P78406 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.37□□□□□ -1.87
RAE1P78406 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.37□□□□□ -1.87
RAE1P78406 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.37□□□□□ -1.87
RAE1P78406 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RAE1P78406 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RAE1P78406 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RAE1P78406 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RAE1P78406 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RAE1P78406 FRG1CP-201ENST00000358464 769 ntBASIC3.36□□□□□ -1.87
RAE1P78406 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RAE1P78406 Y_RNA.33-201ENST00000362591 102 ntBASIC3.36□□□□□ -1.87
RAE1P78406 Y_RNA.301-201ENST00000364990 103 ntBASIC3.36□□□□□ -1.87
RAE1P78406 Y_RNA.480-201ENST00000384364 102 ntBASIC3.36□□□□□ -1.87
RAE1P78406 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.36□□□□□ -1.87
RAE1P78406 AL138878.1-201ENST00000405131 347 ntBASIC3.36□□□□□ -1.87
RAE1P78406 RPS4XP7-201ENST00000406274 780 ntBASIC3.36□□□□□ -1.87
RAE1P78406 RPL21P90-201ENST00000415692 466 ntBASIC3.36□□□□□ -1.87
RAE1P78406 AL035423.1-201ENST00000420331 213 ntBASIC3.36□□□□□ -1.87
RAE1P78406 AL445584.1-201ENST00000431451 330 ntBASIC3.36□□□□□ -1.87
RAE1P78406 RPS3AP46-201ENST00000448352 682 ntBASIC3.36□□□□□ -1.87
RAE1P78406 HMGN2P16-201ENST00000456802 261 ntBASIC3.36□□□□□ -1.87
RAE1P78406 CEACAMP4-201ENST00000457676 421 ntBASIC3.36□□□□□ -1.87
RAE1P78406 AC079140.5-201ENST00000507882 310 ntBASIC3.36□□□□□ -1.87
RAE1P78406 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.36□□□□□ -1.87
RAE1P78406 AC008716.1-201ENST00000511084 513 ntBASIC3.36□□□□□ -1.87
RAE1P78406 RNU6-277P-201ENST00000516272 106 ntBASIC3.36□□□□□ -1.87
RAE1P78406 Y_RNA.675-201ENST00000516389 149 ntBASIC3.36□□□□□ -1.87
RAE1P78406 RNU6-1069P-201ENST00000516612 133 ntBASIC3.36□□□□□ -1.87
RAE1P78406 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.36□□□□□ -1.87
RAE1P78406 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.36□□□□□ -1.87
RAE1P78406 LRRC37A5P-203ENST00000580181 585 ntBASIC3.36□□□□□ -1.87
RAE1P78406 MIR3942-201ENST00000585264 109 ntBASIC3.36□□□□□ -1.87
RAE1P78406 AC093227.2-201ENST00000589357 285 ntBASIC3.36□□□□□ -1.87
RAE1P78406 AC104237.2-201ENST00000612456 443 ntBASIC3.36□□□□□ -1.87
RAE1P78406 RNVU1-4-201ENST00000612985 164 ntBASIC3.36□□□□□ -1.87
RAE1P78406 AL121772.2-201ENST00000614331 297 ntBASIC3.36□□□□□ -1.87
RAE1P78406 AL110115.1-201ENST00000614396 364 ntBASIC3.36□□□□□ -1.87
RAE1P78406 U4.6-201ENST00000621618 127 ntBASIC3.36□□□□□ -1.87
RAE1P78406 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.36□□□□□ -1.87
RAE1P78406 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
RAE1P78406 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RAE1P78406 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RAE1P78406 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RAE1P78406 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.36□□□□□ -1.87
RAE1P78406 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RAE1P78406 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
RAE1P78406 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RAE1P78406 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
RAE1P78406 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAE1P78406 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAE1P78406 RNU6-254P-201ENST00000363377 107 ntBASIC3.35□□□□□ -1.87
RAE1P78406 Y_RNA.212-201ENST00000364177 102 ntBASIC3.35□□□□□ -1.87
RAE1P78406 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAE1P78406 AL356967.1-201ENST00000406305 431 ntBASIC3.35□□□□□ -1.87
RAE1P78406 YPEL5P1-201ENST00000419731 367 ntBASIC3.35□□□□□ -1.87
RAE1P78406 AL158156.1-201ENST00000422509 473 ntBASIC3.35□□□□□ -1.87
RAE1P78406 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.35□□□□□ -1.87
RAE1P78406 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.35□□□□□ -1.87
RAE1P78406 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.35□□□□□ -1.87
RAE1P78406 RNU6-256P-201ENST00000516747 97 ntBASIC3.35□□□□□ -1.87
RAE1P78406 GLYCAM1-201ENST00000546596 285 ntBASIC3.35□□□□□ -1.87
RAE1P78406 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.35□□□□□ -1.87
RAE1P78406 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.35□□□□□ -1.87
RAE1P78406 MIR4425-201ENST00000580572 84 ntBASIC3.35□□□□□ -1.87
RAE1P78406 MIR4795-201ENST00000584182 89 ntBASIC3.35□□□□□ -1.87
RAE1P78406 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.35□□□□□ -1.87
RAE1P78406 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.35□□□□□ -1.87
RAE1P78406 AL121757.2-201ENST00000611223 313 ntBASIC3.35□□□□□ -1.87
RAE1P78406 FAM157A-202ENST00000615155 405 ntBASIC3.35□□□□□ -1.87
RAE1P78406 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
RAE1P78406 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.35□□□□□ -1.87
RAE1P78406 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.35□□□□□ -1.87
RAE1P78406 AL133216.2-202ENST00000634512 349 ntBASIC3.35□□□□□ -1.87
RAE1P78406 MIR1302-1-201ENST00000637932 143 ntBASIC3.35□□□□□ -1.87
RAE1P78406 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.35□□□□□ -1.87
RAE1P78406 AC058791.1-201ENST00000608412 3198 ntBASIC3.35□□□□□ -1.87
RAE1P78406 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAE1P78406 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.35□□□□□ -1.87
RAE1P78406 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
RAE1P78406 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RAE1P78406 AC066616.2-201ENST00000559334 1481 ntBASIC3.35□□□□□ -1.87
RAE1P78406 AL049641.1-201ENST00000441055 1948 ntBASIC3.34□□□□□ -1.87
RAE1P78406 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.34□□□□□ -1.87
RAE1P78406 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RAE1P78406 MIR30E-201ENST00000362104 92 ntBASIC3.34□□□□□ -1.87
RAE1P78406 RNA5SP124-201ENST00000362739 110 ntBASIC3.34□□□□□ -1.87
RAE1P78406 Y_RNA.813-201ENST00000364639 102 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms