Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SNORA31.3-201ENST00000516029 96 ntBASIC4.19□□□□□ -1.74
YBX1P67809 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.19□□□□□ -1.74
YBX1P67809 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.19□□□□□ -1.74
YBX1P67809 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
YBX1P67809 AMZ2P1-203ENST00000565833 850 ntBASIC4.19□□□□□ -1.74
YBX1P67809 MIR548AC-201ENST00000585049 88 ntBASIC4.19□□□□□ -1.74
YBX1P67809 MIR3138-201ENST00000585238 82 ntBASIC4.19□□□□□ -1.74
YBX1P67809 AC114781.5-201ENST00000615297 108 ntBASIC4.19□□□□□ -1.74
YBX1P67809 uc_338.13-201ENST00000618243 179 ntBASIC4.19□□□□□ -1.74
YBX1P67809 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
YBX1P67809 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
YBX1P67809 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
YBX1P67809 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
YBX1P67809 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
YBX1P67809 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
YBX1P67809 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
YBX1P67809 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
YBX1P67809 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
YBX1P67809 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.18□□□□□ -1.74
YBX1P67809 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
YBX1P67809 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
YBX1P67809 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.18□□□□□ -1.74
YBX1P67809 RNU6-338P-201ENST00000383888 105 ntBASIC4.18□□□□□ -1.74
YBX1P67809 Y_RNA.785-201ENST00000384290 109 ntBASIC4.18□□□□□ -1.74
YBX1P67809 Y_RNA.518-201ENST00000384552 113 ntBASIC4.18□□□□□ -1.74
YBX1P67809 Y_RNA.555-201ENST00000384673 110 ntBASIC4.18□□□□□ -1.74
YBX1P67809 SNORA19-201ENST00000384737 128 ntBASIC4.18□□□□□ -1.74
YBX1P67809 SNORD66.1-201ENST00000391230 76 ntBASIC4.18□□□□□ -1.74
YBX1P67809 AL513475.1-201ENST00000406602 315 ntBASIC4.18□□□□□ -1.74
YBX1P67809 MIR548H3-201ENST00000408771 118 ntBASIC4.18□□□□□ -1.74
YBX1P67809 RNU6-607P-201ENST00000411283 108 ntBASIC4.18□□□□□ -1.74
YBX1P67809 AC063979.1-201ENST00000415539 377 ntBASIC4.18□□□□□ -1.74
YBX1P67809 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.18□□□□□ -1.74
YBX1P67809 UBE2D3P2-201ENST00000424409 445 ntBASIC4.18□□□□□ -1.74
YBX1P67809 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.18□□□□□ -1.74
YBX1P67809 ABCF2P2-201ENST00000450549 296 ntBASIC4.18□□□□□ -1.74
YBX1P67809 AC034236.1-201ENST00000469891 373 ntBASIC4.18□□□□□ -1.74
YBX1P67809 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
YBX1P67809 HMGN2P13-201ENST00000476476 274 ntBASIC4.18□□□□□ -1.74
YBX1P67809 RN7SL810P-201ENST00000493031 276 ntBASIC4.18□□□□□ -1.74
YBX1P67809 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.18□□□□□ -1.74
YBX1P67809 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.18□□□□□ -1.74
YBX1P67809 SNORA81.3-201ENST00000517283 198 ntBASIC4.18□□□□□ -1.74
YBX1P67809 AC008489.1-201ENST00000524271 483 ntBASIC4.18□□□□□ -1.74
YBX1P67809 TRAV32-201ENST00000553993 340 ntBASIC4.18□□□□□ -1.74
YBX1P67809 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.18□□□□□ -1.74
YBX1P67809 AC073410.2-201ENST00000603240 332 ntBASIC4.18□□□□□ -1.74
YBX1P67809 AL139395.1-201ENST00000603662 160 ntBASIC4.18□□□□□ -1.74
YBX1P67809 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.18□□□□□ -1.74
YBX1P67809 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.18□□□□□ -1.74
YBX1P67809 MIR4275-201ENST00000636486 87 ntBASIC4.18□□□□□ -1.74
YBX1P67809 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
YBX1P67809 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
YBX1P67809 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
YBX1P67809 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.18□□□□□ -1.74
YBX1P67809 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.18□□□□□ -1.74
YBX1P67809 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
YBX1P67809 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
YBX1P67809 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
YBX1P67809 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.17□□□□□ -1.74
YBX1P67809 PRO1804-201ENST00000623780 2050 ntBASIC4.17□□□□□ -1.74
YBX1P67809 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
YBX1P67809 Y_RNA.20-201ENST00000362479 113 ntBASIC4.17□□□□□ -1.74
YBX1P67809 RNA5SP515-201ENST00000364570 118 ntBASIC4.17□□□□□ -1.74
YBX1P67809 Y_RNA.324-201ENST00000365165 102 ntBASIC4.17□□□□□ -1.74
YBX1P67809 Y_RNA.533-201ENST00000384596 114 ntBASIC4.17□□□□□ -1.74
YBX1P67809 SNORA11F-201ENST00000408237 128 ntBASIC4.17□□□□□ -1.74
YBX1P67809 RPL21P38-201ENST00000418090 167 ntBASIC4.17□□□□□ -1.74
YBX1P67809 RPL23AP2-201ENST00000471227 466 ntBASIC4.17□□□□□ -1.74
YBX1P67809 RPL7P5-201ENST00000471472 736 ntBASIC4.17□□□□□ -1.74
YBX1P67809 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.17□□□□□ -1.74
YBX1P67809 NDUFB4P9-201ENST00000511646 388 ntBASIC4.17□□□□□ -1.74
YBX1P67809 IGKV2-23-201ENST00000518729 323 ntBASIC4.17□□□□□ -1.74
YBX1P67809 IFITM8P-201ENST00000522529 394 ntBASIC4.17□□□□□ -1.74
YBX1P67809 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.17□□□□□ -1.74
YBX1P67809 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
YBX1P67809 AC126177.3-201ENST00000551839 688 ntBASIC4.17□□□□□ -1.74
YBX1P67809 AC007224.1-201ENST00000564410 144 ntBASIC4.17□□□□□ -1.74
YBX1P67809 CYP4A43P-201ENST00000568156 121 ntBASIC4.17□□□□□ -1.74
YBX1P67809 LRRC37A5P-203ENST00000580181 585 ntBASIC4.17□□□□□ -1.74
YBX1P67809 AL158827.2-201ENST00000602494 330 ntBASIC4.17□□□□□ -1.74
YBX1P67809 AL021997.2-201ENST00000615674 271 ntBASIC4.17□□□□□ -1.74
YBX1P67809 AL691447.3-201ENST00000635020 330 ntBASIC4.17□□□□□ -1.74
YBX1P67809 MIR6715B-201ENST00000637172 77 ntBASIC4.17□□□□□ -1.74
YBX1P67809 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.17□□□□□ -1.74
YBX1P67809 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
YBX1P67809 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
YBX1P67809 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.16□□□□□ -1.74
YBX1P67809 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
YBX1P67809 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
YBX1P67809 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
YBX1P67809 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
YBX1P67809 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
YBX1P67809 Y_RNA.105-201ENST00000363182 111 ntBASIC4.16□□□□□ -1.74
YBX1P67809 Y_RNA.183-201ENST00000363882 113 ntBASIC4.16□□□□□ -1.74
YBX1P67809 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
YBX1P67809 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
YBX1P67809 Y_RNA.462-201ENST00000384268 102 ntBASIC4.16□□□□□ -1.74
YBX1P67809 RNU6-611P-201ENST00000384276 104 ntBASIC4.16□□□□□ -1.74
YBX1P67809 RNU6-1179P-201ENST00000384667 107 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms