Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 RNU6-911P-201ENST00000516523 104 ntBASIC5.89□□□□□ -1.47
BRPF1P55201 RNU6-1183P-201ENST00000517054 60 ntBASIC5.89□□□□□ -1.47
BRPF1P55201 AC009812.2-201ENST00000517657 457 ntBASIC5.89□□□□□ -1.47
BRPF1P55201 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.89□□□□□ -1.47
BRPF1P55201 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.89□□□□□ -1.47
BRPF1P55201 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.89□□□□□ -1.47
BRPF1P55201 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.89□□□□□ -1.47
BRPF1P55201 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
BRPF1P55201 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.88□□□□□ -1.47
BRPF1P55201 SNORD113.2-201ENST00000364166 89 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 RNU6-658P-201ENST00000384606 106 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 BTF3L4P2-201ENST00000392798 346 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 MTND3P9-201ENST00000429526 346 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 AC092423.1-201ENST00000430165 186 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 SUMO1P3-201ENST00000439961 304 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 RPS3AP46-201ENST00000448352 682 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 MTCO3P8-201ENST00000453691 755 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 snoU109.2-201ENST00000459316 135 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.88□□□□□ -1.47
BRPF1P55201 RPL30P10-201ENST00000488148 337 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.88□□□□□ -1.47
BRPF1P55201 IGKV2-23-201ENST00000518729 323 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 AC107016.1-201ENST00000550463 337 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.88□□□□□ -1.47
BRPF1P55201 AC006600.1-201ENST00000572529 153 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 AL365434.2-201ENST00000607979 234 ntBASIC5.88□□□□□ -1.47
BRPF1P55201 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRPF1P55201 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.88□□□□□ -1.47
BRPF1P55201 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
BRPF1P55201 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.88□□□□□ -1.47
BRPF1P55201 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
BRPF1P55201 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRPF1P55201 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRPF1P55201 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
BRPF1P55201 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
BRPF1P55201 OR14L1P-202ENST00000641545 3009 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.87□□□□□ -1.47
BRPF1P55201 MAPK10-286ENST00000641208 8747 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 RNU6-1245P-201ENST00000411130 106 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 RNA5SP31-201ENST00000411144 127 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 RNU4-61P-201ENST00000411243 107 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.87□□□□□ -1.47
BRPF1P55201 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.87□□□□□ -1.47
BRPF1P55201 RPS4XP13-201ENST00000483219 789 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 RPL23AP49-201ENST00000492925 468 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.87□□□□□ -1.47
BRPF1P55201 AC040926.1-201ENST00000530195 238 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRPF1P55201 NACAP3-201ENST00000552100 481 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 MIR3939-201ENST00000582614 106 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 AL158827.2-201ENST00000602494 330 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 AC005086.4-201ENST00000623065 213 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 AL691447.3-201ENST00000635020 330 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.87□□□□□ -1.47
BRPF1P55201 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRPF1P55201 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRPF1P55201 CPHL1P-201ENST00000461341 3407 ntBASIC5.87□□□□□ -1.47
BRPF1P55201 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRPF1P55201 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BRPF1P55201 CUL1P1-201ENST00000509510 2425 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BRPF1P55201 RNU6-527P-201ENST00000363425 104 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 RNA5SP28-201ENST00000363841 119 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 RNU4-50P-201ENST00000364361 141 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 RNU6-450P-201ENST00000364654 107 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 Y_RNA.485-201ENST00000384395 102 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 SNORA69.1-201ENST00000390904 137 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 RNA5SP171-201ENST00000391071 115 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 U3.42-201ENST00000408746 214 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 NDUFS5P4-201ENST00000412983 318 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.86□□□□□ -1.47
BRPF1P55201 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.86□□□□□ -1.47
BRPF1P55201 AC007389.2-201ENST00000434630 306 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.86□□□□□ -1.47
BRPF1P55201 CEACAMP4-201ENST00000457676 421 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.86□□□□□ -1.47
BRPF1P55201 RNU1-61P-201ENST00000516107 151 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 RN7SKP289-201ENST00000517244 295 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BRPF1P55201 AL590705.4-201ENST00000532209 134 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.86□□□□□ -1.47
BRPF1P55201 MIR5701-3-201ENST00000578890 82 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.86□□□□□ -1.47
BRPF1P55201 MIR5188-201ENST00000583467 113 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 MIR5701-1-201ENST00000585138 82 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 AC024153.1-201ENST00000603103 365 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 AC009318.2-201ENST00000610917 651 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 MIR5701-2-201ENST00000615634 82 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.86□□□□□ -1.47
BRPF1P55201 AC008079.2-201ENST00000623543 20396 ntBASIC5.86□□□□□ -1.47
BRPF1P55201 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BRPF1P55201 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
BRPF1P55201 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
BRPF1P55201 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.85□□□□□ -1.47
BRPF1P55201 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
BRPF1P55201 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
BRPF1P55201 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms